| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1021 |
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| Symbol | trmD |
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| ID | 3716023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 1185244 |
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| End bp | 1185996 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_346753 |
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| Protein GI | 77457248 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.112953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.558933 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAGCC TGCGCGTAGA CGTCATTACG CTGTTCCCCG AGATGTTCTC GGCCATCAGT
GAGTACGGCA TTACCAGTCG TGCGGTCAAA CAGGGGCTCT TGCAGCTGAC CTGTTGGAAT
CCGCGGGATT ACACGACGGA TCGACATCAC ACTGTGGACG ATCGCCCGTT TGGCGGTGGT
CCGGGCATGG TGATGAAGAT CAAGCCCCTG GAAGATGCTC TGGTTCAGGC CAAGGCAGCA
GCCGGGGAGG CGGCGAAGGT GATTTACCTG TCCCCCCAAG GCCGTCAACT GACTCAGTCG
GCGGTACGCG AACTGGCGAA ATCGGATGCA TTGATCCTGA TTGCCGGTCG CTATGAAGGC
ATTGACGAGC GCTTTATTGA GGCTCATGTC GATGAAGAGT GGTCGATTGG TGACTATGTG
TTGTCTGGCG GCGAGCTGCC GGCCATGGTC ATGATCGATG CGGTTACACG ACTGCTGCCC
GGAGCTTTAG GGCATGCGGA TTCCGCTGAG GAAGATTCCT TTACGGATGG TCTGCTGGAT
TGCCCGCACT ACACCCGACC TGAGGTGTAT GCGGATCAGC GTGTTCCCGA CGTGTTGCTG
AGTGGCAATC ACGCGCATAT CCGGCGTTGG CGTTTACAGC AGTCCCTTGG TCGGACCTAT
GAACGACGCG CCGATCTTCT GGAAAGCCGC TCGCTTTCTG GAGAAGAGAA GAAGCTGCTC
GAGGAATACA TCCGCGAGCG GGACGATAGT TAA
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| Protein sequence | MASLRVDVIT LFPEMFSAIS EYGITSRAVK QGLLQLTCWN PRDYTTDRHH TVDDRPFGGG
PGMVMKIKPL EDALVQAKAA AGEAAKVIYL SPQGRQLTQS AVRELAKSDA LILIAGRYEG
IDERFIEAHV DEEWSIGDYV LSGGELPAMV MIDAVTRLLP GALGHADSAE EDSFTDGLLD
CPHYTRPEVY ADQRVPDVLL SGNHAHIRRW RLQQSLGRTY ERRADLLESR SLSGEEKKLL
EEYIRERDDS
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