Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1018 |
Symbol | |
ID | 3716020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1182821 |
End bp | 1184197 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | signal recognition particle subunit FFH/SRP54 (srp54) |
Protein accession | YP_346750 |
Protein GI | 77457245 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.868706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.626016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAAA ACTTAACCGA CCGTCTCTCG CAGACGCTGC GCCATGTCAC CGGCAAGGCG AAACTGACCG AGGACAACAT CAAAGACACC CTGCGCGAAG TGCGCATGGC GTTGCTCGAA GCCGACGTGG CCCTGCCTGT GGTCAAGGAC TTCGTCAATT CGGTCAAGGA GCGTGCTGTC GGCACCGAGG TGTCGCGCAG CCTGACGCCG GGCCAGGCGT TCGTGAAGAT CGTCCAGGCC GAACTCGAAA GCCTGATGGG CGCGGCCAAC GAAGACTTGA ACCTGAGCGC CGTGCCGCCT GCCGTCATTC TGATGGCCGG TCTGCAGGGT GCGGGTAAAA CCACCACCGC CGGCAAACTG GCGCGCTTCC TTAAAGAGCG CAAGAAGAAG TCGGTCATGG TCGTGTCGGC GGACATCTAC CGCCCTGCTG CTATTAAACA GCTGGAAACC CTGGCCAACG ACATCGGTGT GACGTTCTTC CCGTCCGACC TGAGCCAGAA GCCGGTCGAC ATCGCCAACG CGGCTATTAA AGAAGCAAAA CTGAAATTCA TCGACGTGGT CATCGTCGAC ACCGCCGGTC GTCTGCACAT CGACGAAGAG ATGATGGGCG AAATCAAGGC GCTGCACGCC GCGATCAACC CGGTCGAAAC CCTGTTCGTG GTCGATGCCA TGACCGGTCA GGACGCGGCC AACACGGCCA AGGCTTTCGG TGATGCGCTG CCGCTGACCG GTGTGATCCT GACCAAGGTC GACGGTGATG CCCGTGGTGG TGCCGCGCTG TCCGTTCGTG CGATTACCGG CAAGCCGATC AAGTTCATCG GTATGGGCGA GAAGAGCGAA GCGCTCGATC CGTTCCATCC TGAGCGGATC GCTTCGCGTA TCCTCGGCAT GGGCGACGTG CTCAGCCTGA TCGAACAGGC TGAAGCGACT CTCGATAAGG AAAAGGCCGA CAAGCTTGCT AAAAAGCTGA AGAAGGGCAA GGGCTTCGAC CTCGAAGACT TCCGCGATCA GCTGCAACAG ATGAAGAACA TGGGCGGCCT CGGCGGGCTC ATGGACAAGC TGCCGAACAT CGGCGGCGTC AATCTCTCGC AAATGGGCAA TGCCCAGAAT GCCGCAGAGA AGCAGTTCAA GCAGATGGAA GCCATCATCA ACTCCATGAC CCCGGCCGAG CGCCGCGACC CTGAGCTGAT CAGCGGTTCG CGCAAACGCC GGATCGCCCT CGGTTCCGGC ACCCAGGTGC AGGACATCGG TCGCTTGATC AAGCAGCACA AGCAGATGCA GAAGATGATG AAGAAATTCT CCGCCAAGGG CGGAATGGCG AAAATGATGC GCGGCATGGG CGGAATGTTG CCCGGCGGCG GCATGCCAAA GATGTAA
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Protein sequence | MFENLTDRLS QTLRHVTGKA KLTEDNIKDT LREVRMALLE ADVALPVVKD FVNSVKERAV GTEVSRSLTP GQAFVKIVQA ELESLMGAAN EDLNLSAVPP AVILMAGLQG AGKTTTAGKL ARFLKERKKK SVMVVSADIY RPAAIKQLET LANDIGVTFF PSDLSQKPVD IANAAIKEAK LKFIDVVIVD TAGRLHIDEE MMGEIKALHA AINPVETLFV VDAMTGQDAA NTAKAFGDAL PLTGVILTKV DGDARGGAAL SVRAITGKPI KFIGMGEKSE ALDPFHPERI ASRILGMGDV LSLIEQAEAT LDKEKADKLA KKLKKGKGFD LEDFRDQLQQ MKNMGGLGGL MDKLPNIGGV NLSQMGNAQN AAEKQFKQME AIINSMTPAE RRDPELISGS RKRRIALGSG TQVQDIGRLI KQHKQMQKMM KKFSAKGGMA KMMRGMGGML PGGGMPKM
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