Gene Pfl01_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1016 
Symbol 
ID3716018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1180545 
End bp1181786 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346748 
Protein GI77457243 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.583006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.61306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGTT TGCCCATAGG GCCGATGCTC GCGGTATTTG CCCTGCTGAT TCTCTGGTCG 
GGGCTGTTTA CCGCCGTCGA AGCGGCGCAG CAGTATCTGC TCGCGCAACG CACCGCATCC
CGCGCCAGCG ACAAGCCGCT GGCGAAGCTC AACTTCCCGC TCGACAGCCT GATCCTCTGC
AATACCCTGT GCCGCGCCCT CGCCGTCATT CTGGCCACCC TGCTGGCAAT CTTTCTCTGT
GAAGAAAATG GCCCCTGGGC CGCCTGCCTC GGCGCCGGTG CCTTGCTGCT GGTTTTTGCC
GACTATTTCC CCCGCGCCCT CGCCCAGCGT TATCCGGATG CGGTGCTGTC GTTCGGCAAT
ACGCTGCTGG CAGTACCGCT GAAAGTGGTT TACCCGCTTG CCTGGCTACT CAGCCGCACC
AGTGGTTTGC TAATGCAACC GTTCATCCGC AAGGCCCAGG TGGTGCAACA GAGCGAAGAC
GATGTGCCGG CGGAGCGTCA TGACGACCCG GATCATCCGG TGCGCCCGCA CCCGGTTTCA
GGCATCCATG CGCTGGACAA CATCACGGTC AACGACATTC TGGTGCCGCG CAGCGATGTC
GACGGCATCA ACCTCGACGA CCCGATCGAG GAAATCATCG AGCAATTACG CAAGAACCAA
CGCACTCGCC TGCCGGTTTT CCACAGCGAT ATCAATCAGG TCGAAGCGGT GCTCAATACC
CGGCAGATTC GTCACCTGCT CGACAACGGC AGCCTGACCC GCGAAGCCTT GCTGGCGGCC
AGTTACGAGC CGTATTTCGT CCCTGAAAGC ACCCCGCTGC AACTGCAACT GCTGAACTTC
CACAAGCAGC AACGGCGTCT GGGCATGGTG GTGGACGAAT ACGGCGAAGT GCTCGGCATC
GTCACCCTGG AAGACATTCT CGAAGAAATC GTCGGCGAAT TCGAAAGCGA GCACAGCCTC
GACAATCCGC ACATCCACCC GCAGGCCGAT GGCCGCATGG TGATCGATGG CGCGGCGTCG
ATCCGCGAAC TGAACAAATG CCTGGGCTGG CACCTGCCCA GCGACGGCCC CCGGACCCTC
AATGGCCTGG TGACCGAAGC GCTGGAAACC ATCCCGGAAA GCGCGGTCTG CCTGAAGATC
GGCCGCTACC GGCTGGAGAT TCTCGAAACC GAAGAGAACC GGGTCAGCAA GGTCCTGATC
TGGCACACCA CTTCGGCCCC GACGCTGGCC ACGGCCCGCT AG
 
Protein sequence
MDGLPIGPML AVFALLILWS GLFTAVEAAQ QYLLAQRTAS RASDKPLAKL NFPLDSLILC 
NTLCRALAVI LATLLAIFLC EENGPWAACL GAGALLLVFA DYFPRALAQR YPDAVLSFGN
TLLAVPLKVV YPLAWLLSRT SGLLMQPFIR KAQVVQQSED DVPAERHDDP DHPVRPHPVS
GIHALDNITV NDILVPRSDV DGINLDDPIE EIIEQLRKNQ RTRLPVFHSD INQVEAVLNT
RQIRHLLDNG SLTREALLAA SYEPYFVPES TPLQLQLLNF HKQQRRLGMV VDEYGEVLGI
VTLEDILEEI VGEFESEHSL DNPHIHPQAD GRMVIDGAAS IRELNKCLGW HLPSDGPRTL
NGLVTEALET IPESAVCLKI GRYRLEILET EENRVSKVLI WHTTSAPTLA TAR