Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0994 |
Symbol | rnc |
ID | 3715996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1156288 |
End bp | 1156977 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | ribonuclease III |
Protein accession | YP_346726 |
Protein GI | 77457221 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.683034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0568785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGTTT CTCTAAGCCG TCTCGAGCGT CAGCTCGGTT ACACCTTCAA GGACCAGGAA CTGATGGTCC TGGCCCTTAC GCACCGCAGC TTTGCCGGAC GCAACAACGA GCGTCTGGAA TTCCTCGGCG ATGCGATCCT CAACTTTGTG GCCGGCGAAG CCCTGTTCGA CCGTTTCCCG CTGGCTCGTG AAGGCCAGTT GTCGCGTTTG CGCGCGCGCT TGGTAAAAGG TGAGACGCTG GCGGTGCTGG CCCGCGGTTT CGATCTGGGT GATTACCTGC GTCTGGGTTC CGGCGAGTTG AAGAGCGGCG GTTTCCGTCG CGAATCGATT CTGGCTGACG CCCTTGAAGC ACTGATCGGT GCGATCTACC TCGACGCCGG CATGGAAGTC GCCCGCGAAC GCGTACTGGC CTGGCTGGCC GGCGAGTTCG AAGGCCTGAC GCTGGTCGAT ACCAACAAGG ATCCGAAGAC GCGCCTGCAG GAATTCCTGC AATCGCGCGG CTGCGAACTG CCGCGCTACG AAGTGGTGGA CATCCAGGGC GAGCCGCACT GCCGTACCTT CTTCGTCGAG TGCGAAGTTG TCCTATTGAA TGAAAAAAGC CGGGGTCAGG GTGTGAGCCG TCGTATTGCC GAACAGGTAG CGGCCGCCGC AGCACTGATT GCCCTGGGTG TGGAGAATGG CAATGACTGA
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Protein sequence | MSVSLSRLER QLGYTFKDQE LMVLALTHRS FAGRNNERLE FLGDAILNFV AGEALFDRFP LAREGQLSRL RARLVKGETL AVLARGFDLG DYLRLGSGEL KSGGFRRESI LADALEALIG AIYLDAGMEV ARERVLAWLA GEFEGLTLVD TNKDPKTRLQ EFLQSRGCEL PRYEVVDIQG EPHCRTFFVE CEVVLLNEKS RGQGVSRRIA EQVAAAAALI ALGVENGND
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