Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0975 |
Symbol | |
ID | 3715958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1135733 |
End bp | 1136830 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | amino acid ABC transporter permease |
Protein accession | YP_346707 |
Protein GI | 77457202 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACTC ATACTTTCAA ACCCGATATG CCACCGCCGG CCAAGGTCTT CGGCCCGATG GCGTGGATCC GCGCGAACAT GTTCTCCAGC TGGCTCAATA CGCTGCTGAC CCTGTTTGCG TTCTACCTGA TCTACCTGGT GGTGCCGCCG ATCCTCAGCT GGGCGATCCT CGATGCCAAC TGGGTCGGCA CCACCCGCGC CGACTGCACC AAGGAAGGCG CCTGCTGGGT CTTCATCCAG CAGCGTTTCG GCCAGTTCAT GTACGGCTAC TACCCGCCGG AACTGCGCTG GCGCGTGGAC CTGACCGTGT GGCTGGCGGT CATCGGCGTG GCGCCACTGT TCATCAAGCG CGTGGCGCAC AAGGCGGTGT ACGGCCTGAG CTTCCTGGTG GTCTACCCGA TTGTTGCCTG GTGCCTGCTG CATGGCGGCG TCTTCGGCCT CGACACCGTG GCGACCAGCC AGTGGGGCGG TCTGATGCTG ACCCTTGTGA TCGCCACTGT CGGCATCGCC GGTGCGTTGC CGCTGGGGAT TGTCCTGGCG CTGGGCCGGC GTTCGAACAT GCCGGCGATT CGTGTGGTCT GCGTGACCTT CATCGAGTTC TGGCGCGGCG TGCCGTTGAT CACGGTGCTG TTCATGTCCT CGGTGATGCT GCCGCTGTTC CTGCCCGAAG GCATGAACTT CGACAAGCTG CTGCGGGCGC TGATCGGCGT GATCCTGTTC CAGTCGGCGT ACGTCGCCGA GGTGGTGCGC GGCGGTCTGC AAGCGATCCC CAAAGGCCAG TACGAAGCCG CGGCCGCGAT GGGCCTCGGT TACTGGCGCG CCATGGGCCT GGTGATTCTG CCGCAAGCCC TGAAGCTGGT GATTCCCGGC ATCGTCAACA CCTTCATCGC GCTGTTCAAG GACACCAGCC TGGTGATCAT CATCGGCCTC TTTGACCTGC TCAACAGCGT CAAGCAAGCC GCTGCCGATC CGAAATGGCT GGGCATGGCC ACCGAAGGCT ACGTGTTCGC CGCCCTGGTG TTCTGGATTT TCTGTTTTGG TATGTCGCGC TATTCCATGC ACCTGGAACG CAAGCTCGAC ACTGGCCACA AGCGTTAG
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Protein sequence | MSTHTFKPDM PPPAKVFGPM AWIRANMFSS WLNTLLTLFA FYLIYLVVPP ILSWAILDAN WVGTTRADCT KEGACWVFIQ QRFGQFMYGY YPPELRWRVD LTVWLAVIGV APLFIKRVAH KAVYGLSFLV VYPIVAWCLL HGGVFGLDTV ATSQWGGLML TLVIATVGIA GALPLGIVLA LGRRSNMPAI RVVCVTFIEF WRGVPLITVL FMSSVMLPLF LPEGMNFDKL LRALIGVILF QSAYVAEVVR GGLQAIPKGQ YEAAAAMGLG YWRAMGLVIL PQALKLVIPG IVNTFIALFK DTSLVIIIGL FDLLNSVKQA AADPKWLGMA TEGYVFAALV FWIFCFGMSR YSMHLERKLD TGHKR
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