Gene Pfl01_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0930 
Symbol 
ID3715833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1079964 
End bp1080953 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content64% 
IMG OID 
Productputative FecR 
Protein accessionYP_346662 
Protein GI77457157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.127037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAACA CCGAACGCGT CGTACCGACG CCCGCGCAGG AACAGGCCGC TTTTGCCTGG 
CTGAGCCTGC TGCACGACCG CCCGAGCACC GGTGATCAAC TGACCTTCAG CCAGTGGCTG
CACGCTGACC CGGCTCACGC CGAGGCCTAC GCCCAGGCGC AGGTGGTTTG GGAATTGAGC
GAAGGGCCGG CGCGCACTCT GGCCGATGAA GACGCGCTGG CGTTGCAGGG TTTGCTCAAT
GCGATGGACC AACCGCGCCG TGTACCGGTT CGACGCTGGG CCGGCGCGCT GGCCATGGCG
GCCTGTCTGT TGTTGATGAT CAGCCTCGGC ACAGGTTGGC AGCCGCAGCG CTGGATCGAT
GATCTGGGCG CCGATTACGT GTCGGCACCG GGCGAGATCC GCACCGTGAT CCTCGCCGAT
CAATCGCAGG TGACGCTGGA CGCCGACAGC GCCATCGCCG TGGATTTCAG TCACGGCGAG
CGGCATGTGC AACTGCGCCG GGGCGCCGGA TTTTTCAGCG TGACTCACAC GGGCGATCCT
TTTGTGGTGG AGGCCGAGAA AGGCCAGGCG CGAGTGTTGG GCACGCAGTT CGAAGTGCGC
CTGCAACCGC AAGGTGCCCA AGTGACAGTG CTGTCCGGAC GCGTCGGCGT GACGCCATCC
CGCGATGGCC AACAGCAGGT TCTGACCGCT GGCCAGCAAG TGGCGTACGG CGCAGGCACC
GCGGAAAAAC TCCACGCCGT GGACAGTGAA GCGCAACTGG CATGGCGTCA GGGCTGGCTG
ACTTACTACA AGTCGACACT GGCCGATGTG GTGCAGGATC TGCGGCGTTA TTACCCCGGG
CGCATCGTGT TGCTCAACGA CGAACTGGGC GCGCGCAAGG TCAGCGGCAG CTTTCCGAGC
AAGGATCCGC AAGCCGTGCT GAATTCGCTG CAAGGGGTGT TGGGATTAGA GCAGCATCAG
GTGTTGGGCA AGCTGATCAT CCTGCGCTGA
 
Protein sequence
MNNTERVVPT PAQEQAAFAW LSLLHDRPST GDQLTFSQWL HADPAHAEAY AQAQVVWELS 
EGPARTLADE DALALQGLLN AMDQPRRVPV RRWAGALAMA ACLLLMISLG TGWQPQRWID
DLGADYVSAP GEIRTVILAD QSQVTLDADS AIAVDFSHGE RHVQLRRGAG FFSVTHTGDP
FVVEAEKGQA RVLGTQFEVR LQPQGAQVTV LSGRVGVTPS RDGQQQVLTA GQQVAYGAGT
AEKLHAVDSE AQLAWRQGWL TYYKSTLADV VQDLRRYYPG RIVLLNDELG ARKVSGSFPS
KDPQAVLNSL QGVLGLEQHQ VLGKLIILR