| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0823 |
|---|
| Symbol | |
|---|
| ID | 3715479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 971291 |
|---|
| End bp | 972115 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_346555 |
|---|
| Protein GI | 77457050 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.691508 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.984606 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAACGG AAAGTGATCG TACAACCCGC TTGAGCTATG ATGCCCACAA GCCGAATTTT
CGAGACAAGA TGCAAACCAT GGAAAACACG ATCGACACCC CGCGTCTCCC TCGCAAGCGC
CGCAGCCTGG CTCAGGAACT GGTGACGGTG CTGACCGAGC AGATCCGCGA CGGTCTGCTC
AAGCGCGGCG ACAAGTTGCC GACCGAGTCG GCGATCATGG AGGCCCATGG CGTCAGCCGC
ACCGTGGTGC GCGAGGCGAT TTCCCGTTTG CAGGCGGCGG GGCAGGTGGA AACCCGTCAT
GGCATCGGCA CCTTCGTGCT CGACACCCCG AGCCCGAGCG GTTTCCGGAT CGACCCGGCC
ACCGTGGTCA CCCTGCGTGA CGTGCTGGCC ATTCTCGAAC TGCGTATCAG CCTCGAAGTC
GAATCCGCCG GCCTCGCCGC ACAGCGCCGC AGCGCCGAGC AACTTGCTGC GATGCGCGCG
GCCCTTGATG CGCTGAATGA CAGCGTGGCC CACGCCAGCG ATGCAGTGGC GTCGGACTTC
CAGTTCCATC TGCAAATCGC GCTGTCCACC GGCAACCGCT ATTTCACCGA CATCATGACC
CACCTGGGCA CCAGCATCAT TCCGCGCACT CGCCTGAATT CGGCGCGCCT GGCCCATGAC
GATCAGCAGC ACTACATGAA TCGCCTGAGC CGCGAACACG AAGAAATCTA CGACGCCATC
GCCCGTCAGG ATTCCGATGC CGCCCGTGCG GCCATGCGCC TGCACCTGAC CAACAGCCGC
GAACGGCTGC GTCAGGCGCA TGAAGAGGCG CAGGCGCAGG GGTGA
|
|---|
| Protein sequence | METESDRTTR LSYDAHKPNF RDKMQTMENT IDTPRLPRKR RSLAQELVTV LTEQIRDGLL
KRGDKLPTES AIMEAHGVSR TVVREAISRL QAAGQVETRH GIGTFVLDTP SPSGFRIDPA
TVVTLRDVLA ILELRISLEV ESAGLAAQRR SAEQLAAMRA ALDALNDSVA HASDAVASDF
QFHLQIALST GNRYFTDIMT HLGTSIIPRT RLNSARLAHD DQQHYMNRLS REHEEIYDAI
ARQDSDAARA AMRLHLTNSR ERLRQAHEEA QAQG
|
|---|
| |