| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0793 |
|---|
| Symbol | |
|---|
| ID | 3715370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 930801 |
|---|
| End bp | 933662 |
|---|
| Gene Length | 2862 bp |
|---|
| Protein Length | 953 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | phosphoenolpyruvate--protein phosphotransferase |
|---|
| Protein accession | YP_346525 |
|---|
| Protein GI | 77457020 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.391363 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.339751 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGAGC TCACTGTAGA GCAGATATCC ATGGGCCAGT CGGCTGTGGA TAAACCCGCC
GCTTTGCAAT TGCTGGCCAG TCATCTGGTC GCCGATGGTC TGGTCGCCGA CGGCTACCTC
TCCGGCCTGC AGGCCCGAGA GGCTCAGGGC TCGACCTTCC TCGGCCAAGG CATTGCGATC
CCCCACGGCA CGCCCGAAAC CCGTGATCAG GTGTTCACCA CCGGCGTGCG CCTGATGCAG
TTTCCCGACG GCGTGGACTG GGGCGATGGC CAGATCGTTT ATCTGGCCAT CGGTATCGCT
GCCAAATCCG ACGAACACCT GCGCCTGCTG CAACTGCTGA CCCGTGCCCT TGGCGAGACC
GATCTGGGCC AGGCCCTGCG CCGCGCCAGT TCGCCCGAAG CGCTGCTGAA ACTGCTGCAA
GGCGCGCCGC AAGAGCTGGC GCTGGATGCA CAGATGATCG GCCTCGGCGT ATCGGCCGAC
GATTTCGAAG AGCTGGTCTG GCGGGGTGCG CGTCTGCTGC GCCAGGCCGA TTGCGTGAGC
AACGGTTTCG CCGGGGTATT GCAGCAGGTC GAAGCGCTAC CGCTGGGCGA TGGCCTGTGG
TGGCTGCACA GCGAGCAGAC CGTAAAGCGT CCGGGGCTGG CGTTCGTCAC GCCGGACAAA
CCGATGCGTT ACCTCGGCCA GCCGCTCAGC GGTCTGTTCT GTCTGGCCAG CCTCGGTGAA
GCGCATCAGG CGTTGCTCGA GCGTTTGTGC GCGTTGCTGA TAGAAGGTCG CGGCCATGAA
CTGGGCCGTG CCACCAGCAG CCGCAAAGTC CTTGAAGTGC TCGGCGGTGA GTTGCCCGCC
GATTGGCCGA GTGCGCGTAT CGCACTGGCC AACGCCCATG GTCTGCATGC GCGGCCGGCG
AAGATCCTCG CGCAACTGGC GAAAAGTTTT GACGGCGAAA TCCGTGTGCG CATCGTCGAC
GGTCAGGACA GCGCCGTATC GGTGAAAAGC CTGAGCAAAT TGCTGAGCCT CGGCGCCCGT
CGTGGCCAGG TGCTGGAAAT CATCGCCGAG CCGAGCATCG CCGCCGATGC GTTGCCGGCG
TTGTTGGCGG CGATCGAGGA AGGCCTCGGT GAAGAAGTCG AACCACTGCC CGCAGTCAGC
CAACAGCGCG AAGTCATCGC CGACATCGCC GAAGTCCTGA GCGCCCCGGC CTCCGGCAGC
CTGCTGCAAG CGATTCCCGC CGCCCCCGGC ATCGCCATCG GCCCGGCGCA CATTCAGGTC
CAGCAAGCCA TCGACTATCC GCTGCGCGGC GAGTCCGCCG CCATCGAGCG CGAGCGTCTC
AAGCAAGCGC TGGCCGACGT GCGTCAGGAC ATTCAGGGCC TGATCGAACG CAGCAAGGCC
AAGGCGATCC GCGAGATTTT CATCACCCAC CAGGAAATGC TCGACGACCC GGAACTCACC
GATGAAGTCG ACACTCGCCT CAAGCAGGGT GAAAGCGCCG AAGCAGCCTG GATGGCCGTG
ATCGAAGCCG CCGCAAAACA ACAGGAGTCG TTGCACGACG CGTTGCTCGC CGAACGTGCC
GCCGATCTGC GCGACATTGG TCGTCGGGTG CTGGCGCAAC TGTGTGGTGT GCAGACGCCC
GCCGAGCCTG AGCAACCGTA CATTCTGGTG ATGGATGAAG TCGGCCCGTC CGATGTGGCG
CGGCTGGATC CGGCGCGGGT GGCGGGGATT CTCACCGCCC GTGGTGGCGC CACCGCTCAC
AGCGCCATCG TGGCCCGCGC GCTGGGGATT CCTGCGCTGG TCGGTGCGGG CGCTGCGGTG
TTGCTGCTGA AACCGGGCAC GCCGTTGCTG CTCGACGGCC AGCGCGGTCG CCTGCATGTG
GACGCGGATG CCGCTACCCT GCAACGCGCC AGCGAAGAGC GTGACACCCG CGAACAACGT
CTGAAAGCCG CCGCCGAACA ACGCCATCAA CCGGCGCACA CCACCGACGG CCACGCCGTG
GAAGTGTTCG CCAACATCGG TGAAAGCGCC GGTGTGATCA GCGCGGTGGA GCAGGGCGCC
GAAGGCATCG GCCTGCTGCG CACCGAACTG ATTTTCATGG CCCATCCGCA GGCGCCGGAC
GAGGCGACTC AGGAAGCCGA ATACCGCCGC GTCCTCGACG GCCTCGCCGG TCGGCCGCTG
GTGGTGCGCA CGCTTGATGT CGGCGGCGAC AAACCGCTGC CGTATTGGCC GATCGCCAAG
GAAGAAAACC CGTTCCTCGG TGTGCGCGGG ATTCGCCTGA CCTTGCAGCG TCCGCAGATC
ATGGAAGCGC AGTTGCGCGC CTTGCTGCGT TCGGCGGACA ACCGTCCGTT GCGGATCATG
TTCCCGATGG TCGGCAGCGT TGAAGAGTGG CGTCAGGCCC GCGACATGAC CGAACGCCTG
CGTCTGGAAA TCCCGGTTCC CGATCTGCAA CTGGGGATCA TGATCGAAGT GCCGTCCGCC
GCACTGCTGG CGCCGGTGCT GGCCAAAGAG GTGGACTTCT TCAGCGTCGG CACCAACGAC
CTGACCCAGT ACACGCTGGC GATCGACCGT GGTCATCCGA CCCTGTCCGC CCAGGCTGAC
GGCCTGCACC CGGCGGTTCT GCAACTGATT GACATCACCG TGCGCGCGGC CCATGCCCAC
GGCAAATGGG TCGGCGTGTG CGGCGAGCTG GCGGCGGATC CGCTGGCGGT GCCGGTGCTG
GTCGGCCTCG GTGTGGATGA ACTGAGCGTC TCCGGGCGCA GTATCGCCGA GGTCAAGGCA
CGCATCCGCG AACTCAGCCT GACCCAGACT CAAACCCTTG CTCAACAAGC CCTGGCCGTG
GGCAGCGCCA ACGAAGTGCG CGCATTAGTG GAGGCCCTGT AA
|
|---|
| Protein sequence | MLELTVEQIS MGQSAVDKPA ALQLLASHLV ADGLVADGYL SGLQAREAQG STFLGQGIAI
PHGTPETRDQ VFTTGVRLMQ FPDGVDWGDG QIVYLAIGIA AKSDEHLRLL QLLTRALGET
DLGQALRRAS SPEALLKLLQ GAPQELALDA QMIGLGVSAD DFEELVWRGA RLLRQADCVS
NGFAGVLQQV EALPLGDGLW WLHSEQTVKR PGLAFVTPDK PMRYLGQPLS GLFCLASLGE
AHQALLERLC ALLIEGRGHE LGRATSSRKV LEVLGGELPA DWPSARIALA NAHGLHARPA
KILAQLAKSF DGEIRVRIVD GQDSAVSVKS LSKLLSLGAR RGQVLEIIAE PSIAADALPA
LLAAIEEGLG EEVEPLPAVS QQREVIADIA EVLSAPASGS LLQAIPAAPG IAIGPAHIQV
QQAIDYPLRG ESAAIERERL KQALADVRQD IQGLIERSKA KAIREIFITH QEMLDDPELT
DEVDTRLKQG ESAEAAWMAV IEAAAKQQES LHDALLAERA ADLRDIGRRV LAQLCGVQTP
AEPEQPYILV MDEVGPSDVA RLDPARVAGI LTARGGATAH SAIVARALGI PALVGAGAAV
LLLKPGTPLL LDGQRGRLHV DADAATLQRA SEERDTREQR LKAAAEQRHQ PAHTTDGHAV
EVFANIGESA GVISAVEQGA EGIGLLRTEL IFMAHPQAPD EATQEAEYRR VLDGLAGRPL
VVRTLDVGGD KPLPYWPIAK EENPFLGVRG IRLTLQRPQI MEAQLRALLR SADNRPLRIM
FPMVGSVEEW RQARDMTERL RLEIPVPDLQ LGIMIEVPSA ALLAPVLAKE VDFFSVGTND
LTQYTLAIDR GHPTLSAQAD GLHPAVLQLI DITVRAAHAH GKWVGVCGEL AADPLAVPVL
VGLGVDELSV SGRSIAEVKA RIRELSLTQT QTLAQQALAV GSANEVRALV EAL
|
|---|
| |