Gene Pfl01_0747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0747 
Symbol 
ID3715204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp877388 
End bp878644 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content56% 
IMG OID 
ProductPhage integrase 
Protein accessionYP_346479 
Protein GI77456974 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.236649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.444279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACTA ACGCAACCCG CCTCTCCGAT CGCCAGCTCA AGGCAGTCAA GGCAACTGGT 
AAAGACTTCG TCCTCAGCGA CGGCGACGGC CTGCAGCTTC GAGTACGCGC CAGCGGCTCG
ATGATGTGGA ATTTCAATTA CCGCGAGCCG TTGACCAGAA GCCGTCTTAA TATGGCGCTC
GGTCCATACC CCGACCTCTC GCTAGCCAAC GCCCGGAAGA AAGCAGCAGA GGCGCGTGAG
CTGCTCGCTT TGGGCATTGA TCCCAAAACC CAGCGTGATG AGGTAAGGCA AGCCAAACTT
GCTGAGACTG AACACACGTT CGAGAAGGTG GCCACCGCCT GGTTCGAGCT GAAGAAAGAC
TCCGTAACCA AAGCCTACGC CGAAGACATT TGGAGATCGC TGACGCTCCA TGTGTTCCCA
AGCATGAAAA CAACGCCGCT TTCTCAAATC ACTGCTCCGA TGGTTATCAA GATCCTTCGC
CCAATCGAGG CCAAAGGGAG TCTCGAAACC GTGAAGCGAT TGAGTCAACG ACTCAACGAG
ATCATGACCT ACGGGGTCAA CTCCGGGCTG ATATTTGCGA ACCCCCTCAA TGGAATTCGG
GCGGTCTTCA AGAAACCCAA GAAAGAGAAC ATGGCTGCGC TACCACCTGA GGAGCTTCCC
GAGCTCATGA TGGAAATCGC GAATGCCAGC ATCAAGCGCA CGACCCGCTG CCTGATCGAA
TGGCAGTTGC ACACGATGAC CCGCCCCGCC GAAGCAGCCA CCACACGATG GGCAGATATC
GACTTCGACA AGCGCATTTG GACCATTCCG CCAGAGCGCA TGAAAAAGCG GCGCCCGCAC
ACAATCCCCC TCACCGATCA GGCACTTTCG TTACTCGAAA CGCTCAAGCA ACTCAGTGGT
AACAGAGAGT ACGTGTTCCC CTCAGATAGA AACCCCCGCA CCCATGCCAA TAGCCAGACC
GCCAACATGG CGTTGAAGCG CATGGGCTTT CAGGACCGTC TAGTCAGCCA CGGCTTGCGC
TCGATGGCGA GCACCATCCT GAATGAGCAT GGCTGGGATC CGGAGCTGAT TGAGGTCGCA
CTTGCGCATG TCGACAAGGA CGAAGTTCGT AGCGCCTACA ACCGGACGGA TTACATCGAA
CGCCGGCGTC CGATGATGGC TTGGTGGAGT GAACATATCC AGAAGGCGGC CACCGGCAGC
CTGTCCGCAT CGGCCATCAA TCAAACTAGA GATCGCAACG TCGTACCGAT TCGCTGA
 
Protein sequence
MPTNATRLSD RQLKAVKATG KDFVLSDGDG LQLRVRASGS MMWNFNYREP LTRSRLNMAL 
GPYPDLSLAN ARKKAAEARE LLALGIDPKT QRDEVRQAKL AETEHTFEKV ATAWFELKKD
SVTKAYAEDI WRSLTLHVFP SMKTTPLSQI TAPMVIKILR PIEAKGSLET VKRLSQRLNE
IMTYGVNSGL IFANPLNGIR AVFKKPKKEN MAALPPEELP ELMMEIANAS IKRTTRCLIE
WQLHTMTRPA EAATTRWADI DFDKRIWTIP PERMKKRRPH TIPLTDQALS LLETLKQLSG
NREYVFPSDR NPRTHANSQT ANMALKRMGF QDRLVSHGLR SMASTILNEH GWDPELIEVA
LAHVDKDEVR SAYNRTDYIE RRRPMMAWWS EHIQKAATGS LSASAINQTR DRNVVPIR