Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0728 |
Symbol | |
ID | 3715033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 855264 |
End bp | 857183 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | chemotaxis sensory transducer |
Protein accession | YP_346461 |
Protein GI | 77456956 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGCT GGTTCGGCAA CATCAGCGTG AACCTGAAAC TGGGGCTCGG ATTCGGCCTC GTCCTGGCCC TGACCTGCAT CCTGGCACTC ACTGGCTGGA CCAGCCTGGG CGGCCTGATT GACCGCAGCA ACTGGATGAG CGACATCACC CAGCTCAACG CTGGCCTGAC CAAACTGCGC GTGGTGCGCC TGCAATACAT GCTGACCAAC GGCGACGAAA CCGCCGCGCA GAACGTGCAG ACCACCCTCG ACGGGTTCGC CGCCCAACAG CAGAAGCTGA TAAGCAGCTT CAAGAGCCCG GAAAACGTCA AACTGCTCAA GGAGCAGGCG GCGACCATCG CCGAATACCA GACGTCCCTG AACAAAATGC GTAACGCCTA CCGCACCGGC AACACGGCGC GCGACTCGAT GGCCACCAGT GCCGCGACGG CTTACGGCCT GATCGAAGCG CTGAGCAACC GCGTTCAGCA AATGCCGCTG AGCGATGAAC GTTTCGAGCA GTTCCAGGCC GTCACCGCCG CCAAGGAAGC GTTCATCCTG GCGCGCTACG AAGTGCGTGG CTACACCGCC ACCGCCAACG CCGAGACCGA GCAGAAAGCC GTCGGCCAAC TGGACGTGGC CATCGCCAGC CTCAAGCCAC TGAACACGCA TTTCGCCAGC ACCCAACAGG ACGCCCTGCG TCAGCTGGAA ACCGCACTGA CCAACTACCG CAGCGCCTTG CAGGCGTTCA AGAACGCCAA CACCGATGCG GTGCAGGCGC GCAAGGAAAT GACCGATCAG GGCGCGACCA TCGTGACCCT GAGCGAGCAG TTGTATCAGA TCCAGCTCGA TCGCCGTGAT GCAGAAAGCG CCCAGGCCCG CACCCTGCAA CTGATCAGCA CCCTGCTGGC GTTGCTGGTC GGCATCATCG CTGCCTTCAT CATCACCCGT CAGATCACCC GTCCGCTGCA GGAAACCATG GCTGTGGTCG ACCGCATCGC CAGCGGCGAC CTGAGCCACA ACGTGATCGT CACCCGCCGC GACGAACTCG GCGTGCTGCA ACAAGGCATC GCGCGCATGG GCGTGACCCT GCGCGACCTG ATCAGCGGCA TCCGCGACGG CGTGACCCAG ATCGCCAGCG CCGCCGAAGA ACTGTCGGCC GTGACCGAAC AGACCAGCGC CGGCGTGAAC AGCCAGAAGG TCGAGACCGA TCAGGTCGCC ACCGCGATGC ACGAGATGAC TGCCACTGTG CAGGAAGTCG CGCGCAATGC CGAAGAAGCC TCGCAAGCCG CAGCCGCCGC TGACGGCGAA GCCCGCGAAG GCGATAAGGT GGTGAACGAA GCCATCGCCC AGATCGAGCG TCTGGCCAGC GAAGTGGTGC GCTCCACCGA AGCCATGAGC GTGCTGCAAC AGGAAAGCGA CAAGATCGGC AGCGTCATGG ACGTGATCAA GGCTGTGGCC GAACAGACCA ACCTGCTGGC CCTCAACGCC GCCATCGAAG CCGCCCGTGC CGGTGAAGCC GGTCGTGGTT TTGCCGTGGT CGCCGACGAA GTCCGTGGCC TGGCCCAGCG CACGCAGAAA TCCACCGAGG AAATCGAAGG CCTGGTGGCC GGTCTGCAGA ACGGCACGCA GCAAGTGGCC GCCGTGATGA ACAACAGCCG CGCCCTGACC GACAGCAGCG TCGCCCTGAC CCGCAAGGCC GGCGACTCCC TGGAAAACAT CACCCGCACG GTGTCGAACA TCCAGTCGAT GAACCAGCAG ATCGCCGCAG CCGCCGAACA GCAAAGCGCC GTGGCCGAAG AAATCAGCCG CAGCATCATC AACGTCCGCG ACGTGTCGGA ACAGACCGCA GCGGCGAGTG ATGAGACGGC CAAGTCCAGC GTTGAACTGG CGCGGTTGGG TGGGCAGTTG CAGCAGATGG TGAGCCATTT CCGCGTGTAA
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Protein sequence | MNSWFGNISV NLKLGLGFGL VLALTCILAL TGWTSLGGLI DRSNWMSDIT QLNAGLTKLR VVRLQYMLTN GDETAAQNVQ TTLDGFAAQQ QKLISSFKSP ENVKLLKEQA ATIAEYQTSL NKMRNAYRTG NTARDSMATS AATAYGLIEA LSNRVQQMPL SDERFEQFQA VTAAKEAFIL ARYEVRGYTA TANAETEQKA VGQLDVAIAS LKPLNTHFAS TQQDALRQLE TALTNYRSAL QAFKNANTDA VQARKEMTDQ GATIVTLSEQ LYQIQLDRRD AESAQARTLQ LISTLLALLV GIIAAFIITR QITRPLQETM AVVDRIASGD LSHNVIVTRR DELGVLQQGI ARMGVTLRDL ISGIRDGVTQ IASAAEELSA VTEQTSAGVN SQKVETDQVA TAMHEMTATV QEVARNAEEA SQAAAAADGE AREGDKVVNE AIAQIERLAS EVVRSTEAMS VLQQESDKIG SVMDVIKAVA EQTNLLALNA AIEAARAGEA GRGFAVVADE VRGLAQRTQK STEEIEGLVA GLQNGTQQVA AVMNNSRALT DSSVALTRKA GDSLENITRT VSNIQSMNQQ IAAAAEQQSA VAEEISRSII NVRDVSEQTA AASDETAKSS VELARLGGQL QQMVSHFRV
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