Gene Pfl01_0723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0723 
Symbol 
ID3714737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp851003 
End bp852460 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content64% 
IMG OID 
Productamidohydrolase 
Protein accessionYP_346456 
Protein GI77456951 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.43512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTACG ACACCCTGAT TCGCAACGCC CTGGTCATCG ACGGCAGCAA CCGCCCCGGT 
TACGCCGCCG ACGTGGCGAT CCTCGGCGGC CGCATCGCGC AGATCGGCGA CTTGCACGAC
GTCAGCGCCA GCGAGGAAAT CGATGCTGCC GGCCGTGTGC TGGCGCCGGG TTTCATCGAT
GTGCACACCC ACGACGACAC CGTGGTGATC CGCCAGCCGC AGATGCTGCC CAAGCTCAGC
CAGGGCGTGA CCACGGTGAT CGTCGGCAAC TGCGGCATCA GTGCCGCGCC GGTCAGTTTG
CGCGGCGATC CACCGGATCC GATGAACCTG CTCGGCTCGG CGGCGGCGTT CGTTTATCCG
CGTTTCAGCG ATTACCGCGC AGCGGTGGAA GCGGCCAATA CCACACTGAA CGTCGCGGCG
CTGGTCGGGC ATACGGCGCT GCGCAGCAAT CATCTTGATG ATCTGTTTCG CACCGCGACT
GACGATGAAA TCGCCGCGAT GCGCGAGCAG TTGCGTGAAA GCCTGGAGGC GGGCGCCCTT
GGTTTATCCA CAGGTCTGGC GTATGCGAGT GCGTTCTCGG CATCCACCGA TGAAGTCATG
CAACTGACCG AAGAACTGAA TGCGTTCGGC GCGGTGTACA CCACCCACCT GCGCAGTGAA
TTCGAACCGG TGCTGGAAGC AATGGACGAG GCCTTCCGCA TCGGCCGCCA TGCTCAATCA
CCGGTGATTA TTTCCCACCT CAAATGCGCC GGCGCCGGTA ACTGGGGCCG CAGTCCGCAG
TTGCTCGCTT CGCTGGAAGA AGCGGCAAAA ACTCATCCGG TCGGCTGCGA TTGCTATCCG
TATGCGGCGA GTTCTTCGAC CCTGGATCTG AAGCAGGTCA CCGACGCCCA CCGCATCACC
ATCACCTGGT CGACGCCGCA TCCGGAAATG GGCGGTCGCG ACCTGATGGA CATCGCCGCC
GAATGGAACC TGTCGTTGCT CGACGCCGCC AAACGCCTGC AACCGGCGGG CGCGGTGTAT
TACGGCATGG ACGAGAACGA CGTGCGCCGG ATCCTCGCTC ATCCGCTGTC GATGGTCGGT
TCCGATGGCC TGCCGGAAGA CCCGTTCCCG CACCCACGTC TGTGGGGCGC TTTCCCACGG
GTGCTCGGCC ATTTCAGTCG CGATGTCGGC CTGTTTCCGC TGCACACCGC CGTGCACAAG
ATGACCGGTC TGTCGGCGGC GCGTTTCGGC TTGAAGGAAC GGGGCGAGAT CCGTGAAGGC
CACTGGGCCG ATCTGGTGTT GTTCGACCCG GCGACCGTGC GCGACGTGGC GGATTTCAAC
GACCCGCAGC GTGCCGCGCA AGGAATCGAA GGGGTGTGGA TCAATGGCGT GTTGAGTTAT
CGCGACAGCC AGGCCAACGG GCAAACAGCA GGGCGGTTCC TGGCGCGCCA GGGCGATCTG
CGCGACGGCT TTCGTTGA
 
Protein sequence
MLYDTLIRNA LVIDGSNRPG YAADVAILGG RIAQIGDLHD VSASEEIDAA GRVLAPGFID 
VHTHDDTVVI RQPQMLPKLS QGVTTVIVGN CGISAAPVSL RGDPPDPMNL LGSAAAFVYP
RFSDYRAAVE AANTTLNVAA LVGHTALRSN HLDDLFRTAT DDEIAAMREQ LRESLEAGAL
GLSTGLAYAS AFSASTDEVM QLTEELNAFG AVYTTHLRSE FEPVLEAMDE AFRIGRHAQS
PVIISHLKCA GAGNWGRSPQ LLASLEEAAK THPVGCDCYP YAASSSTLDL KQVTDAHRIT
ITWSTPHPEM GGRDLMDIAA EWNLSLLDAA KRLQPAGAVY YGMDENDVRR ILAHPLSMVG
SDGLPEDPFP HPRLWGAFPR VLGHFSRDVG LFPLHTAVHK MTGLSAARFG LKERGEIREG
HWADLVLFDP ATVRDVADFN DPQRAAQGIE GVWINGVLSY RDSQANGQTA GRFLARQGDL
RDGFR