Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0644 |
Symbol | |
ID | 3713560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 754818 |
End bp | 755708 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | type II secretion system protein |
Protein accession | YP_346377 |
Protein GI | 77456872 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.807912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATGC CTCTGATGAT CAGCGCCCTG TTGATGCTGG GCGCTGCACT GTTGCTGATC AGCGGCCTGC TCGACCGCCG CCGTCGCTCG CGACAGGTCA CGCGGCGGCT GGAAGGTGCG CTGCTGCGCG ACAATCGTTT CGGCAACCTG CTGCAAGTAC TTGGCGGCAG CGCCCTCGGC CAGCGCGCAG TCAAGCTCGA CAACGAAACC CAGACCCTGC TCAACCGCCT CGGCTGGCGC AGCGCCCGCC AGCGTTCGCT GTTCGCCGCC TGCCAGATCG GTACGCCGCT GCTGTTGCTG AGCGTGGCGG TCTTGCTGCA AGGGGTGCTG TTTCCTCACA TCGAGCGTCA ATGGATCGCC CCGCTGTTTG CCCTCGGCAT CGGCTACCTG TTGCCCAAAC GCCTGCTGGC GATGGCCGCC GGCCGCCGGC AAAAACAACT GGCCACGGAA ATCTCCACCT TCATTCCTTT GCTGCGCATC CTGTTCGAAG CCGGCATGGC CGTCGAGCAG GCGTTGCGCG TGCTCAGCCA TGAAGGCCAG ACGTTGCTGC CGGTGCTGAC CCAGGAATTG CGTCTGGTGC TGGCCCGGGT CGACTCGGGC CTGGAGCTGG GCGAGGAACT GAACAAGGCC ACGCGCCTGC TGGCGGTGGA CGAATTCACC GACACCTGCG TGATCCTTCA GCAACTGCTG CAACAGGGCG GGGGCGCGAT GAAATCGCTG CTGGCGCTCA AGCAACTGCT CGATGACCGA CGCCTGACCA GGCTGCAGGA ATACATCTCG AAAATGTCCG CCAAAATGTC CGTCGTGATG ATGATGTTTC TCTTCCCGGC GCTGTTGATC GTCCTCGCAG GCCCGGGCTT CAGTGCCCTG GCGCGGGCAC TGGGCTCATA G
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Protein sequence | MTMPLMISAL LMLGAALLLI SGLLDRRRRS RQVTRRLEGA LLRDNRFGNL LQVLGGSALG QRAVKLDNET QTLLNRLGWR SARQRSLFAA CQIGTPLLLL SVAVLLQGVL FPHIERQWIA PLFALGIGYL LPKRLLAMAA GRRQKQLATE ISTFIPLLRI LFEAGMAVEQ ALRVLSHEGQ TLLPVLTQEL RLVLARVDSG LELGEELNKA TRLLAVDEFT DTCVILQQLL QQGGGAMKSL LALKQLLDDR RLTRLQEYIS KMSAKMSVVM MMFLFPALLI VLAGPGFSAL ARALGS
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