Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0627 |
Symbol | |
ID | 3712384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 737398 |
End bp | 739311 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | arginine decarboxylase |
Protein accession | YP_346360 |
Protein GI | 77456855 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.424029 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTAC GACGCACACG CAAAGACGAT GGCAGCCAAT GGACAGTTGC GGACAGCCGC AGTGTTTACG GGATTCGCCA TTGGGGGGCC GGGTATTTCG CGATCAATGA CGCCGGTCGC GTCGAAGTTC GTCCGAACGG CCCGAGCAGC TCGCCTATCG ATCTGTTCGA ACAAGTCGAC CAGTTGCGCA AGAGTGGCTT GTCCCTGCCG CTGCTGGTGC GTTTCCCCGA CATCCTGCAA GACCGCGTCC GTCAGCTGAC CGGCGCTTTC GATGCGAACA TCGAGCGTCT GGAATACCAG AGCAAATACA CCGCGCTGTA CCCGATCAAG GTCAACCAGC AGGAAGCGGT GATCGAGAAC ATCATCGCCA CCCAGAACGT TTCCATCGGT CTGGAAGCCG GCTCCAAGCC TGAGCTGCTG GCGGTGCTGG CACTGGCGCC GAAGGGCGGC ACCATCGTCT GCAACGGTTA CAAGGACCGC GAGTTCATCC GTCTGGCGCT GATGGGCCAG AAGCTCGGTC ACAATGTGTT CATCGTGATC GAGAAAGAAT CCGAAGTCGG TCTGGTGATC GAAGAAGCCG CCTCGCTGAA GGTCAAGCCA CAGGTCGGCC TGCGCGTGCG TCTGTCGTCC CTGGCGTCGT CGAAGTGGGC GGACACCGGT GGCGAGAAAT CCAAGTTCGG TCTGTCGGCG GCGCAACTGT TGTCGGTGGT CGAGCGCTTC CGCGCGGCGG GTCTGGATCA GGGCATTCGT CTGCTGCACT TCCACATGGG TTCGCAGATC GCCAACCTGG CCGATTACCA GCACGGTTTC AAGGAAGCGA TCCGCTACTA CGGCGAGTTG CGCAACCTCG GTCTGCCGGT CGATCACATC GACGTCGGCG GCGGTCTGGG TGTGGACTAC GACGGTACCC ACTCGCGCAA CGCCAGTTCG ATCAACTACG ACATGGACGA CTACGCCGGT GTCGTGGTCG GCATGCTCAA GGAGTTCTGC GACGCGCAGG CCCTGCCGCA TCCGCACATC TTCTCCGAAA GCGGCCGCTC GTTGACCGCG CACCACGCGA TGCTGGTGGT GCAGGTGACC GACGTCGAGA AACACAACGA CGACGTGCCG CAGATCGAGA ACAAGGAAGC GCTGCCGGAA ACCGTGCAGT GGCTGGTTGA CCTGCTCGGC CCGACCGACA TCGAAATGGT CACCGAGACC TACTGGCGCG CCACTCACTA CATGAGCGAC GTGGCCGCCC AGTACGCCGA CGGCAAACTG ACCCTGGCCG AGAAAGCCCT GGCCGAGCAG TGCTACTTCG CGGTGTGCCG TCGCCTGCAC AACTCGCTGA AAGCGCGTCA GCGTTCGCAC CGTCAGGTGC TGGACGAACT CAACGACAAG CTGGCCGACA AGTACATCTG CAACTTCTCG GTGTTCCAGA GCCTGCCGGA CACCTGGGCG ATCGATCAGG TCCTGCCGAT CATCCCGCTG CACCGTCTCG ACGAAGAGCC GCTGCGTCGT GCCGTTCTGC AAGACCTGAC CTGCGACTCC GACGGCAAGA TCAACCAGTA CGTCGACGAG CAGAGCATCG AGACCAGCCT GCCGGTGCAT GCGCTGAACG AAGGTGAAGA CTACCTGCTG GGCGTGTTCC TGGTCGGCGC CTATCAGGAA ATCCTCGGCG ACATGCACAA CCTGTTCGGT GACACCGACT CGGTGAACAT CTATCAGAAC GCCGATGGCA GCGTGTACCA CGCCGGCATT GAAACCCACG ACACCATCGA AGACATGCTG CGTTACGTGC ACTTGTCGCC GGAAGAGCTG ATGACCCACT ACCGCGACAA GTGCGCCAGT GCCCGCATCA GCGCCAGCGA GCGCACCCAG TTCCTCGATG CATTGCGCCT GGGTCTGACC CGCTCCTCCT ACCTGTCTTC CTGA
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Protein sequence | MSVRRTRKDD GSQWTVADSR SVYGIRHWGA GYFAINDAGR VEVRPNGPSS SPIDLFEQVD QLRKSGLSLP LLVRFPDILQ DRVRQLTGAF DANIERLEYQ SKYTALYPIK VNQQEAVIEN IIATQNVSIG LEAGSKPELL AVLALAPKGG TIVCNGYKDR EFIRLALMGQ KLGHNVFIVI EKESEVGLVI EEAASLKVKP QVGLRVRLSS LASSKWADTG GEKSKFGLSA AQLLSVVERF RAAGLDQGIR LLHFHMGSQI ANLADYQHGF KEAIRYYGEL RNLGLPVDHI DVGGGLGVDY DGTHSRNASS INYDMDDYAG VVVGMLKEFC DAQALPHPHI FSESGRSLTA HHAMLVVQVT DVEKHNDDVP QIENKEALPE TVQWLVDLLG PTDIEMVTET YWRATHYMSD VAAQYADGKL TLAEKALAEQ CYFAVCRRLH NSLKARQRSH RQVLDELNDK LADKYICNFS VFQSLPDTWA IDQVLPIIPL HRLDEEPLRR AVLQDLTCDS DGKINQYVDE QSIETSLPVH ALNEGEDYLL GVFLVGAYQE ILGDMHNLFG DTDSVNIYQN ADGSVYHAGI ETHDTIEDML RYVHLSPEEL MTHYRDKCAS ARISASERTQ FLDALRLGLT RSSYLSS
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