Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0590 |
Symbol | |
ID | 3712308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 681448 |
End bp | 682713 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein |
Protein accession | YP_346323 |
Protein GI | 77456818 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGTC GCAGTTTGAT CAAGGCTTTC ACACTCACGG CATCCATTGC CGCGATGGGC ATGACCTGGA CCGTACAGGC CGCCGAGACC ATCAAGGTCG GGATTCTGCA TTCGTTGTCC GGCACCATGG CGATCTCCGA AACGTCGCTC AAGGACATGG CGTTGATGAC CATCGACGAG ATCAACGCCA AGGGCGGGGT GAACGGCAAG ATGCTGGAAC CGGTGGTGGT CGACCCGGCG TCGAACTGGC CGCTGTTCGC GGAAAAGGGC CGCCAGTTGC TGACTCAGGA CAAGGTCGCG GTGGTGTTCG GCTGCTGGAC CTCGGTATCG CGCAAATCGG TGCTGCCGGT GTTCGAAGAA CTCAACGGCC TGCTGTTCTA CCCGGTGCAA TACGAAGGCG AAGAGATGTC GCCGAACGTG TTCTACACCG GCGCCGCGCC GAACCAGCAA GCGATCCCGG CGGTTGAGTA CCTGATGAGC GAAGAAGGCG GCAGCGCCAA GCGCTACTTC CTGCTCGGCA CCGACTACGT CTACCCGCGC ACCACCAACA AGATTCTGCG TTCGTTCCTG CATTCCAAAG GCGTCGCGGA CAAAGACATC GAAGAGGTCT ACACCCCGTT CGGCCACAGC GACTATCAAA CCATCGTCGC CAACATCAAA AAATTCTCGG CCGGCGGCAA GACCGCGGTG ATCTCCACCG TCAACGGCGA CTCCAACGTG CCGTTCTACA AAGAGCTGGC CAACCAGGGC CTGAAAGCCA CCGACGTACC GGTGGTGGCG TTCTCGGTGG GCGAAGAAGA ACTGCGCGGC ATCGACACCA AGCCGCTGGT GGGCAACCTC GCGGCATGGA ACTACTTCGA GTCGGTGGAG AACCCGGTGA ACAAGAAGTT CGTCGATGAC TGGAAAGCCT ACGCGAAGAA ACACAACCTG CCGGGCGCCG ACAAGGCCGT GACCAACGAC CCGATGGAGG CCACTTACGT CGGCATTCAC ATGTGGGCGC AGGCGGCGGA GAAAGCCAAA TCCACCGACG TCGACAAGGT CCGCGAAGCC CTCGGCGGCC AGACCTTTGC CGCGCCGTCG GGCTACACCC TGACCATGGA CAAGACCAAT CACCACCTGC ACAAACCGGT GATGATCGGC GAGATCCAGA GCGACGGTCA GTTCAACGTG GTGTGGCAGA CCGAGGGGCC GATTCGGGCG CAACCGTGGA GTCCGTTCAT TCCGGGTAAT GACAAGAAGC CGGAGTATGC GGTGAAGAGC AACTGA
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Protein sequence | MKRRSLIKAF TLTASIAAMG MTWTVQAAET IKVGILHSLS GTMAISETSL KDMALMTIDE INAKGGVNGK MLEPVVVDPA SNWPLFAEKG RQLLTQDKVA VVFGCWTSVS RKSVLPVFEE LNGLLFYPVQ YEGEEMSPNV FYTGAAPNQQ AIPAVEYLMS EEGGSAKRYF LLGTDYVYPR TTNKILRSFL HSKGVADKDI EEVYTPFGHS DYQTIVANIK KFSAGGKTAV ISTVNGDSNV PFYKELANQG LKATDVPVVA FSVGEEELRG IDTKPLVGNL AAWNYFESVE NPVNKKFVDD WKAYAKKHNL PGADKAVTND PMEATYVGIH MWAQAAEKAK STDVDKVREA LGGQTFAAPS GYTLTMDKTN HHLHKPVMIG EIQSDGQFNV VWQTEGPIRA QPWSPFIPGN DKKPEYAVKS N
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