Gene Pfl01_0590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0590 
Symbol 
ID3712308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp681448 
End bp682713 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content61% 
IMG OID 
Productbranched-chain amino acid ABC transporter, periplasmic amino acid-binding protein 
Protein accessionYP_346323 
Protein GI77456818 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGTC GCAGTTTGAT CAAGGCTTTC ACACTCACGG CATCCATTGC CGCGATGGGC 
ATGACCTGGA CCGTACAGGC CGCCGAGACC ATCAAGGTCG GGATTCTGCA TTCGTTGTCC
GGCACCATGG CGATCTCCGA AACGTCGCTC AAGGACATGG CGTTGATGAC CATCGACGAG
ATCAACGCCA AGGGCGGGGT GAACGGCAAG ATGCTGGAAC CGGTGGTGGT CGACCCGGCG
TCGAACTGGC CGCTGTTCGC GGAAAAGGGC CGCCAGTTGC TGACTCAGGA CAAGGTCGCG
GTGGTGTTCG GCTGCTGGAC CTCGGTATCG CGCAAATCGG TGCTGCCGGT GTTCGAAGAA
CTCAACGGCC TGCTGTTCTA CCCGGTGCAA TACGAAGGCG AAGAGATGTC GCCGAACGTG
TTCTACACCG GCGCCGCGCC GAACCAGCAA GCGATCCCGG CGGTTGAGTA CCTGATGAGC
GAAGAAGGCG GCAGCGCCAA GCGCTACTTC CTGCTCGGCA CCGACTACGT CTACCCGCGC
ACCACCAACA AGATTCTGCG TTCGTTCCTG CATTCCAAAG GCGTCGCGGA CAAAGACATC
GAAGAGGTCT ACACCCCGTT CGGCCACAGC GACTATCAAA CCATCGTCGC CAACATCAAA
AAATTCTCGG CCGGCGGCAA GACCGCGGTG ATCTCCACCG TCAACGGCGA CTCCAACGTG
CCGTTCTACA AAGAGCTGGC CAACCAGGGC CTGAAAGCCA CCGACGTACC GGTGGTGGCG
TTCTCGGTGG GCGAAGAAGA ACTGCGCGGC ATCGACACCA AGCCGCTGGT GGGCAACCTC
GCGGCATGGA ACTACTTCGA GTCGGTGGAG AACCCGGTGA ACAAGAAGTT CGTCGATGAC
TGGAAAGCCT ACGCGAAGAA ACACAACCTG CCGGGCGCCG ACAAGGCCGT GACCAACGAC
CCGATGGAGG CCACTTACGT CGGCATTCAC ATGTGGGCGC AGGCGGCGGA GAAAGCCAAA
TCCACCGACG TCGACAAGGT CCGCGAAGCC CTCGGCGGCC AGACCTTTGC CGCGCCGTCG
GGCTACACCC TGACCATGGA CAAGACCAAT CACCACCTGC ACAAACCGGT GATGATCGGC
GAGATCCAGA GCGACGGTCA GTTCAACGTG GTGTGGCAGA CCGAGGGGCC GATTCGGGCG
CAACCGTGGA GTCCGTTCAT TCCGGGTAAT GACAAGAAGC CGGAGTATGC GGTGAAGAGC
AACTGA
 
Protein sequence
MKRRSLIKAF TLTASIAAMG MTWTVQAAET IKVGILHSLS GTMAISETSL KDMALMTIDE 
INAKGGVNGK MLEPVVVDPA SNWPLFAEKG RQLLTQDKVA VVFGCWTSVS RKSVLPVFEE
LNGLLFYPVQ YEGEEMSPNV FYTGAAPNQQ AIPAVEYLMS EEGGSAKRYF LLGTDYVYPR
TTNKILRSFL HSKGVADKDI EEVYTPFGHS DYQTIVANIK KFSAGGKTAV ISTVNGDSNV
PFYKELANQG LKATDVPVVA FSVGEEELRG IDTKPLVGNL AAWNYFESVE NPVNKKFVDD
WKAYAKKHNL PGADKAVTND PMEATYVGIH MWAQAAEKAK STDVDKVREA LGGQTFAAPS
GYTLTMDKTN HHLHKPVMIG EIQSDGQFNV VWQTEGPIRA QPWSPFIPGN DKKPEYAVKS
N