Gene Pfl01_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0560 
Symbol 
ID3712955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp654721 
End bp655293 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content70% 
IMG OID 
ProductHupE/UreJ protein 
Protein accessionYP_346293 
Protein GI77456788 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.180214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.949799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTCA AACGCATTCT CGGCGCCGTC GCACTGCTGT TGACCCCGGC CCTGGCCTTC 
GCTCACCCCG GCCACGGCGA CTCTGGCCTG GTGGCCGGCA TCAGCCACCC GATCGGTGGC
CTCGACCATT TGCTGGCGAT GGTGGCCGTC GGTCTGTGGG CTGCGCAGCA GCAAGGCGCC
GCGCGCTGGG CGCTGCCGTG CACCTTTGTC GGCACCATGC TGATCGGCGG TTTGCTCGGT
TTTGAAGGGC TGGAGCTGCC GGCGCTGGAA AGCGGGATTG CCGCCTCGGT GCTGGCGCTG
GGCCTGGCGG TGGCGCTGGC CGTGCGTCCA CCGCTGGTGA TGGCGGTGGC GGCGACGGCG
CTGTTTGCGC TGTTCCATGG CGTGGCCCAT GGTCTGGAGT TGCCGGACAT GTCGAGCCCA
TGGGCGTATG CCGCCGGATT CGTGGTCGCA ACGGCTGCGC TGCATGCGGC GGGTTATGCG
GTCGTGCGTT TTCTGCCTCA GGCGGCCGCG CCGCTGGTGC GACTGGCCGG CACCGCTTCG
GCGGTGACGG GCGCGTGGTT GCTGGCCGGC TGA
 
Protein sequence
MTLKRILGAV ALLLTPALAF AHPGHGDSGL VAGISHPIGG LDHLLAMVAV GLWAAQQQGA 
ARWALPCTFV GTMLIGGLLG FEGLELPALE SGIAASVLAL GLAVALAVRP PLVMAVAATA
LFALFHGVAH GLELPDMSSP WAYAAGFVVA TAALHAAGYA VVRFLPQAAA PLVRLAGTAS
AVTGAWLLAG