Gene Pfl01_0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0526 
Symbol 
ID3712994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp608889 
End bp609758 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content59% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346259 
Protein GI77456754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0925485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.267523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATA AATCGCTGAT CGCCCTGATC GTTGGCGTTG TTGTGGTACT GGTTGGCTGG 
AACTGCTTCT ACATCGTCGC TCAGACCGAG CGCGCGGTGT TGCTGCAATT CGGTCGCGTG
GTTCAGGCTG ACGTTCAGCC GGGTCTGCAT GTGAAGGTGC CTTACGTTAA CCAGGTGCGT
AAATTCGACG CACGTCTGAT GACGCTGGAT GCGCCGACGC AACGCTTCCT GACGCTGGAA
AAGAAAGCCG TGATGGTCGA TGCCTACGCC AAGTGGCGCG TGAAGGATGC CGAGCGCTTC
TACACCGCAA CGTCCGGCCT CAAGCAGATC GCCGACGAGC GTCTGTCCCG TCGTCTGGAA
TCGGGTCTGC GTGACCAGTT CGGTAAGCGC ACCCTGCACG AAGTGGTGTC GGGTGAGCGC
GATGCGCTGA TGGCCGATAT CACCGCGTCG CTGAACAAGA TGGCGGAAAA AGAGCTGGGT
ATCGAAGTGG TCGATGTCCG GGTCAAGGCC ATCGATCTGC CGAAAGAAGT GAACCGCAGC
GTGTTCGAGC GCATGAGCAC CGAGCGTGAG CGTGAAGCTC GCGAGCACCG CGCCAAGGGT
AACGAGCTGG CCGAAGGCAT CCGTGCCGAC GCCGATCGTC AACGCCGTGT GCTGCTGGCT
GAAGCCTATC GTGAATCCGA AGAGATTCGC GGTGACGGTG ATGCCCAGGC CGCTGCGATC
TACTCCAAGG CCTACGGTCA GGATCAGGAG TTCTACGGTT TCTACCGTAG CCTGCGTGCC
TACCGTGAAA GCTTTGCGAA CAAATCCGAC GTCCTGGTCC TCGACCCAAG CAGCGACTTC
TTCCGTTACC TGGAAAAGTC CAAGCCTTGA
 
Protein sequence
MSNKSLIALI VGVVVVLVGW NCFYIVAQTE RAVLLQFGRV VQADVQPGLH VKVPYVNQVR 
KFDARLMTLD APTQRFLTLE KKAVMVDAYA KWRVKDAERF YTATSGLKQI ADERLSRRLE
SGLRDQFGKR TLHEVVSGER DALMADITAS LNKMAEKELG IEVVDVRVKA IDLPKEVNRS
VFERMSTERE REAREHRAKG NELAEGIRAD ADRQRRVLLA EAYRESEEIR GDGDAQAAAI
YSKAYGQDQE FYGFYRSLRA YRESFANKSD VLVLDPSSDF FRYLEKSKP