Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0509 |
Symbol | psd |
ID | 3713150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 590767 |
End bp | 591627 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | phosphatidylserine decarboxylase |
Protein accession | YP_346242 |
Protein GI | 77456737 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0592417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAGC GTTTGTTTAT CATCAGCCAG TACCTGCTGC CGCATCACTT GCTGTCGCGC CTTGCCGGCT GCATTGCCGA GTGCCGCGTG CGCTGGTTCA AGAATGCCTT CACCACCTGG TTCGCCAAGC GTTATCAAGT GGACATGTCG CAGGCACTGG TTGAAGACGT GACCGCTTAC GAGCACTTCA ACGCCTTCTT CACCCGCGCC TTGAAAGACG GCGCTCGCCC ACTGGATCAG ACCCCGGGCG CGATCCTCAG CCCGGCCGAC GGTGCGATCA GCCAGCTCGG CCCGATCGAA CACGGTCGTA TCTTCCAGGC CAAGGGCCAC AGCTTCAGCG TGCTGGAACT GCTGGGCGGC GACGCGGCCA ATGCGGCACC GTTCATGGGC GGTGAATTCG CGACTGTTTA CCTGTCGCCG AAGGACTACC ACCGCGTGCA CATGCCGCTG GCCGGCACCC TGCGAGAAAT GGTCTACATC CCGGGCCGGA TCTTCTCGGT CAACCAGACC ACCGCAGAAA ACGTTCCGGA ACTGTTCGCC CGCAACGAGC GTGTAGCGTG CATCTTCGAC ACCGAGCGCG GGCCAATGGC CGTGGTGCTG GTGGGCGCGA TGATCGTGGC CTCGATCGAA ACCGTGTGGG CCGGTCTGGT CACGCCACCG AAGCGCGAAC TGAAAACCTT CCGTTACGAC GAAGCCGCCC GTGCGCCGAT TCATCTGGAG AAAGGTGCGG AACTGGGGCG CTTCAAGCTG GGTTCGACCG CGATCGTGCT GTTCGGGCCG GATCAGGTGA AATGGGTTGA AGAATTGAAA GCCGGCTCGC CGGTACAGAT GGGTCAGGCC CTGGCACAGT CGAACGCCTG A
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Protein sequence | MKERLFIISQ YLLPHHLLSR LAGCIAECRV RWFKNAFTTW FAKRYQVDMS QALVEDVTAY EHFNAFFTRA LKDGARPLDQ TPGAILSPAD GAISQLGPIE HGRIFQAKGH SFSVLELLGG DAANAAPFMG GEFATVYLSP KDYHRVHMPL AGTLREMVYI PGRIFSVNQT TAENVPELFA RNERVACIFD TERGPMAVVL VGAMIVASIE TVWAGLVTPP KRELKTFRYD EAARAPIHLE KGAELGRFKL GSTAIVLFGP DQVKWVEELK AGSPVQMGQA LAQSNA
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