Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0499 |
Symbol | |
ID | 3713062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 577085 |
End bp | 578992 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | DNA topoisomerase IV subunit B |
Protein accession | YP_346232 |
Protein GI | 77456727 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACTC CCAGCGCTAG CTCCTATAAC GCCGACGCCA TCGAAGTCCT CTCGGGCCTC GACCCGGTGC GCAAACGCCC CGGCATGTAC ACCGACACCA GTCGGCCGAA CCACCTTGCC CAGGAAGTCA TCGACAACAG TGTCGACGAA GCCCTGGCCG GCCACGCCAA ATCGATTCAG GTCATCCTCC ACGCCGACCA CTCGCTGGAA GTCTGCGACG ACGGCCGTGG CATGCCGGTC GACATCCACC CGGAAGAGGG GGTGTCTGGC GTTGAACTGA TCCTCACCAA GCTCCATGCG GGCGGCAAGT TTTCCAACAA GAACTACCAG TTCTCCGGCG GTCTGCACGG GGTGGGTATT TCCGTGGTCA ACGCCTTGTC GACCCAGGTA CGGGTGCGGG TCAAGCGTGA CGGCAACGAA TACGAAATGA CCTTCGCCGA CGGCTTCAAG GCCACCGATC TGCAAGTGAT CGGCACCGTC GGCAAGCGCA ATACCGGGAC CAGCGTGTAC TTCGCGCCGG ACCCGAAATA CTTTGACTCA CCAAAATTCT CCATCAGCCG CCTCAAGCAT GTGCTCAAGG CCAAGGCCGT TCTGTGCCCG GGGCTGCTGA TCAGCTTCGA AGACAAAGGC ACCGGCGAAA AGGTCGAGTG GCATTACGAG GATGGCTTGC GCTCCTATCT GGTGGACGCG GTCAGCGAAT TCGAGCGTCT GCCGGATGCC CCGTTCTGCG GCAACCTGGC CGGCACCAAG GAAGCGGTCG AGTGGGCGCT GCTGTGGCTG CCGGAAGGCG GCACCTCGGT CACTGAAAGC TACGTCAACC TGATCCCGAC GGAGCAGGGC GGCACCCACG TCAACGGTCT GCGTCAGGGC CTGCTCGATG CGATGCGCGA ATTCTGCGAG TTCCGCAGCC TGCTGCCGCG CGGCGTGAAG CTGGCGCCGG AAGACGTCTG GGAGCGCATT GCTTTCGTCC TGTCGATGAA GATGCAGGAA CCGCAATTCT CCGGCCAGAC CAAAGAGCGC CTGTCATCCC GTGAAGCGGC GGCTTTCGTT TCCGGTGTGG TCAAGGACGC GTTCAGCCTG TGGCTCAACG CCAACCCGGA AACCGGTCTG GCCCTGGCAG AGCTGGCGAT CAGCAACGCC GGCCGTCGTC TGAAGGCCAG CAAAAAAGTC GAGCGCAAAC GCATCACCCA GGGACCGGCA TTGCCGGGCA AACTGGCCGA CTGTGCCGGG CAGGACCCGA TGCGTTCCGA GCTGTTCCTG GTGGAAGGTG ATTCCGCCGG CGGTTCGGCC AAACAGGCGC GGGACAAGGA GTTCCAGGCG ATCCTGCCGT TGCGCGGCAA GATCCTCAAC ACCTGGGAAG TCGACGGCAG CGAAGTGCTG GCCAGCCAGG AAGTGCACAA CATCGCGGTG GCCATCGGGG TCGATCCGGG CGCCGAGGAC ATGAGCCAGC TGCGCTACGG CAAGATTTGC ATCCTCGCCG ACGCCGACTC CGACGGCCTG CACATCGCGA CCCTGCTCTG TGCCTTGTTC GTCCAGCATT TCCGCCCGCT GGTGGATGCC GGTCACGTCT ATGTCGCGAT GCCGCCGTTG TACCGCATCG ACCTGGGCAA AGAGATCTAC TACGCCCTCG ACGAAGCCGA GCGCGACGGG ATCCTCGACC GTCTGGTCGC CGAGAAGAAA CGCGGCAAGC CGCAGGTCAC CCGATTCAAA GGCCTGGGTG AAATGAACCC GCCGCAACTG CGCGAAACCA CCATGGACCC GAACACCCGG CGCCTGGTGC AGTTGACCCT CGGGGGCGAC TTCGCCGAGA CCTCGGAAAT GATGGACATG CTGCTGGCGA AAAAACGCGC CGGCGACCGC AAGACCTGGC TCGAATCCAA GGGTAACCTC GCCGAGGTTC TGGCCTGA
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Protein sequence | MATPSASSYN ADAIEVLSGL DPVRKRPGMY TDTSRPNHLA QEVIDNSVDE ALAGHAKSIQ VILHADHSLE VCDDGRGMPV DIHPEEGVSG VELILTKLHA GGKFSNKNYQ FSGGLHGVGI SVVNALSTQV RVRVKRDGNE YEMTFADGFK ATDLQVIGTV GKRNTGTSVY FAPDPKYFDS PKFSISRLKH VLKAKAVLCP GLLISFEDKG TGEKVEWHYE DGLRSYLVDA VSEFERLPDA PFCGNLAGTK EAVEWALLWL PEGGTSVTES YVNLIPTEQG GTHVNGLRQG LLDAMREFCE FRSLLPRGVK LAPEDVWERI AFVLSMKMQE PQFSGQTKER LSSREAAAFV SGVVKDAFSL WLNANPETGL ALAELAISNA GRRLKASKKV ERKRITQGPA LPGKLADCAG QDPMRSELFL VEGDSAGGSA KQARDKEFQA ILPLRGKILN TWEVDGSEVL ASQEVHNIAV AIGVDPGAED MSQLRYGKIC ILADADSDGL HIATLLCALF VQHFRPLVDA GHVYVAMPPL YRIDLGKEIY YALDEAERDG ILDRLVAEKK RGKPQVTRFK GLGEMNPPQL RETTMDPNTR RLVQLTLGGD FAETSEMMDM LLAKKRAGDR KTWLESKGNL AEVLA
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