| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0409 |
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| Symbol | |
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| ID | 3712456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 464468 |
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| End bp | 466546 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_346142 |
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| Protein GI | 77456637 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00714943 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.127719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGGA TTTTCTCCAC CCTCGGTTTC TCGCTATGGA TAGCGCTGCT TTCGCCGATG
GTACAGGCAG CCAATCTGAA GGCGCTGGAC GTCGCGGCAC TGCCGGGCGA CCGGGTCGAG
CTGAAGCTGT CGTTCGATGG CCCACCTCCG CAGCCAAAGG GTTACACCAC CGATTCGCCG
GCGCGGATTG CCCTCGATCT GCCGGGTGTT GCCAGTCAGC TGGCGAGCAA GACTCGCGAC
CTGGGCAGTG GCAATGCCCG TACGGCCACG GTGGTCGAGG CCAATAATCG GACGCGGCTG
ATCATCAGCC TGACGCAACT GGCGCCGTAC GACACCCGGG TCGAAGGCAA TACGGTGTTT
GTGGTGGTCG GGCAGGGCAG CAAAGCCGCG GCACCGCGTA CGGCAGCTCG TGCACCGCGT
GCGGCACCTG CGGCAGCGCC GGTCCGCACG TATACGCCGA CCGCCAGGGC CATTCGCGGC
GTGGATTTCC AGCGTGGCAC GGCGGGTGAG GGCAATGTGG TCATCGACTT GTCCGACCCG
GCTATCGCCC CGGACATTCA GGAGCACGAC GGCAAGATCA TCCTCAATTT CGCCCGTACC
CAACTGCCCG AACCGCTGCG GGTGCGCCTC GATGTCAAGG ATTTCGCCAC CCCGGTGCAG
TTCGTCAATG CCGGCGTCAG TGGTGATCGC GCGACGATCA CCGTCGAACC CAGCGGTACG
TTCGACTATT CCACCTACCA GACCGACAAC AAGCTGACCG TCAGTATCCG GCCGTTGACC
GTCGATGACC TGCAAAAGCG CAACGCCGAC CGCAACAGCT ATAACGGCGA AAAGCTCTCT
CTCAACTTCC AGGACATCGA TGTGCGTTCG GTGCTGCAAC TGATCGCCGA CTTCACCAAC
CTCAATCTGG TAGCCAGCGA TACGGTACAG GGCGGGATCA CCTTGCGCCT GCAAAACGTG
CCGTGGGATC AGGCGCTGGA TCTGGTGCTC AAGACCAAGG GGCTGGACAA GCGCAAGGTC
GGCAATGTGT TGCTGGTGGC GCCGGCGGAT GAAATCGCCG CCCGCGAACG GCAGGAACTG
GAATCGCAAA AACAGATCGC CGAGCTGGCA CCGCTGCGCC GCGAGCTGCT GCAAGTGAAC
TACGCCAAGG CTGCGGACAT CGCCAAGCTG TTCCAGTCGG TCACCAGTGC CGAGGCCAAG
GTCGACGAAC GGGGTTCGAT CACCGTCGAT GAGCGGACCA ACAACATCAT TGCCTACCAG
ACTCAGGATC GCCTCGACGA ACTGCGGCGG ATTGTGGCGC AGCTGGATAT TCCGGTGCGT
CAGGTGATGA TCGAGGCGCG GATCGTCGAG GCCAACGTCG ATTACGACAA GAGCTTGGGC
GTGCGCTGGG GCGGTTCGAT TCAGAACAAG GGCAACTGGA ACACTTCCGG GGTCAGCAAC
GGTTCGTCGA CCACCATTGG CACGCCGGGC AGCACCAGCA CCAACTCGCC GTTCGTCGAC
ATGGGCACGG TCAACAACAC GTCCGGGATC GGCATCGCGT TCATCACCGA CAACGTCTTG
CTCGACCTTG AGCTGACCGC GATGGAGAAG ACCGGCAATG GCGAAATCGT CTCGCAGCCC
AAGGTGGTCA CGTCCGACAA GGAAACCGCG AAGATCCTCA AGGGCACCGA GATTCCGTAT
CAGGAAGCCA GCTCCAGCGG TGCTACGTCG GTGTCCTTCA AGGAGGCGTC GCTGTCGCTG
GAAGTGACGC CGCAGATCAC CCCGGACAAC CGCATCATCA TGGAGGTCAA GGTCACCAAG
GACGAACCGG ACTACCTGAA CAAAGTGCAG GATGTACCGC CGATCAAGAA GAACGAGGTC
AATGCCAAGG TGCTGGTGAA CGACGGCGAG ACCATCGTGA TCGGGGGCGT TTTCTCAAAT
ACTCAAAGCA AGGTCGTAGA TAAGGTGCCA TTTCTTGGCG ATGTGCCGTA TCTTGGCCGC
CTTTTCCGGC GTGATGTGGT TTCGGAGAAA AAATCCGAGC TGCTGGTATT TCTCACTCCG
CGTATCATGA ATAACCAGGC GATTGCTGTG AGTCGTTGA
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| Protein sequence | MNRIFSTLGF SLWIALLSPM VQAANLKALD VAALPGDRVE LKLSFDGPPP QPKGYTTDSP
ARIALDLPGV ASQLASKTRD LGSGNARTAT VVEANNRTRL IISLTQLAPY DTRVEGNTVF
VVVGQGSKAA APRTAARAPR AAPAAAPVRT YTPTARAIRG VDFQRGTAGE GNVVIDLSDP
AIAPDIQEHD GKIILNFART QLPEPLRVRL DVKDFATPVQ FVNAGVSGDR ATITVEPSGT
FDYSTYQTDN KLTVSIRPLT VDDLQKRNAD RNSYNGEKLS LNFQDIDVRS VLQLIADFTN
LNLVASDTVQ GGITLRLQNV PWDQALDLVL KTKGLDKRKV GNVLLVAPAD EIAARERQEL
ESQKQIAELA PLRRELLQVN YAKAADIAKL FQSVTSAEAK VDERGSITVD ERTNNIIAYQ
TQDRLDELRR IVAQLDIPVR QVMIEARIVE ANVDYDKSLG VRWGGSIQNK GNWNTSGVSN
GSSTTIGTPG STSTNSPFVD MGTVNNTSGI GIAFITDNVL LDLELTAMEK TGNGEIVSQP
KVVTSDKETA KILKGTEIPY QEASSSGATS VSFKEASLSL EVTPQITPDN RIIMEVKVTK
DEPDYLNKVQ DVPPIKKNEV NAKVLVNDGE TIVIGGVFSN TQSKVVDKVP FLGDVPYLGR
LFRRDVVSEK KSELLVFLTP RIMNNQAIAV SR
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