Gene Pfl01_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0398 
Symbol 
ID3712484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp451341 
End bp452057 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content64% 
IMG OID 
Productsporulation-like 
Protein accessionYP_346131 
Protein GI77456626 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.533657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGCCA AGAAAAAACC TGCACCCAAG CGTGGCGCCA GCCGTTACCA AGCTCCAGCG 
AAGCAGCCGA TTCCGGGCTG GCTGTGGATG GCCATCGGCC TGACGGTCGG CGCGTTCATC
GTATTCCTGA TGAAACTGGA GCCGGGCAAG GGCAGCGACA CGGTCAAGCG CGAGAAGATC
GAGCAACAGC AACAACAGAA AGCCACCAAG ATCGCCGAGG CCAACAAGAC CCCGCCGAGC
CCGACGCAAC CGGTGAAGCC GAAGTACGAC TTCTACACCT TGCTGCCGGA ATCGGAAGTG
ATCGTGCCGC CGGACGCGGT GCCTGAGAAA ACCCTGCCGA CGCCACAGGT GCCGGCAATC
CCGACCACGC CGGTGACCCC GGCGGAAGCG GCGAAGATCG ACACCGCACG GGCACAGGCT
GCACTGGCCG GGATCACCCC GCCGCCAGCG CCGCCGGTGA CCAAGGCTGC ACCGGTGACC
AAGTTCTTCC TCCAGGCCGG CTCGTTCCGC AAAGAAACGG ATGCCGACAA GGTGCGCGCG
CAGATCATTC TGCTCGGTCA GGCGGTCGCG GTTGAATCCG GGACAGTGAA GGATGAAACC
TGGTACCGCG TACTGGTCGG CCCGTTCAGC AACCGCGAAC AGCTGACCAC CGCCCAGAAA
CAACTGGCGG GCGCCGGCTT CAGCAACCTG TTGTTACAAC AACGCCAGAG CCGCTGA
 
Protein sequence
MAAKKKPAPK RGASRYQAPA KQPIPGWLWM AIGLTVGAFI VFLMKLEPGK GSDTVKREKI 
EQQQQQKATK IAEANKTPPS PTQPVKPKYD FYTLLPESEV IVPPDAVPEK TLPTPQVPAI
PTTPVTPAEA AKIDTARAQA ALAGITPPPA PPVTKAAPVT KFFLQAGSFR KETDADKVRA
QIILLGQAVA VESGTVKDET WYRVLVGPFS NREQLTTAQK QLAGAGFSNL LLQQRQSR