Gene Pfl01_0326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0326 
Symbol 
ID3713354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp371097 
End bp371834 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content61% 
IMG OID 
Product1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 
Protein accessionYP_346059 
Protein GI77456554 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.407351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATTA TTCCCGCTAT CGATCTTAAA GACGGTGCCT GCGTACGTCT GCGCCAGGGC 
CGCATGGAAG ATTCCACAGT GTTCTCCGAT GACCCGGTGA GCATGGCTGC CAAGTGGGTG
GAAGGCGGTT GCCGTCGTCT GCATCTGGTC GACCTGAACG GGGCTTTCGA AGGCCAGCCG
GTCAACGGCG AAGTGGTGAC CGCGATCGCC AAGCGCTACC CGACCCTGCC GATCCAGATC
GGCGGCGGCA TTCGTTCGCT GGAAACCATC GAGCACTACG TCAAGGCTGG CGTGAGCTAC
GTGATCATCG GCACCAAAGC GGTGAAGGAT CCGGCGTTTG TCGCTGAAGC CTGCCGCGCG
TTCCCGGGCA AGATCATCGT CGGTCTGGAT GCCAAGGACG GTTTTGTCGC CACCGATGGC
TGGGCTGAAA TCAGCACCGT GCAAGTTATC GACCTGGCCA AGCAGTTCGA AGCCGACGGC
GTGTCCTCGA TCGTTTATAC CGACATCGCC AAAGACGGCA TGATGCAGGG CTGCAACGTT
CCGTTCACCG CCGCGCTGGC GGCTGCCACG AAGATCCCGG TGATCGCTTC CGGCGGCATT
CACAACCTCG GTGACATCAA GTCGCTGCTC GACGCCAAGG TGCCAGGCAT CATCGGCGCC
ATCACCGGCC GGGCGATCTA CGAAGGCACT CTCGACGTCG CCGAAGCGCA AGCTTTCTGC
GACTCGTACC AAGGCTGA
 
Protein sequence
MLIIPAIDLK DGACVRLRQG RMEDSTVFSD DPVSMAAKWV EGGCRRLHLV DLNGAFEGQP 
VNGEVVTAIA KRYPTLPIQI GGGIRSLETI EHYVKAGVSY VIIGTKAVKD PAFVAEACRA
FPGKIIVGLD AKDGFVATDG WAEISTVQVI DLAKQFEADG VSSIVYTDIA KDGMMQGCNV
PFTAALAAAT KIPVIASGGI HNLGDIKSLL DAKVPGIIGA ITGRAIYEGT LDVAEAQAFC
DSYQG