| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0239 |
|---|
| Symbol | |
|---|
| ID | 3712131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 281620 |
|---|
| End bp | 282813 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | Acyl-CoA dehydrogenase-like |
|---|
| Protein accession | YP_345972 |
|---|
| Protein GI | 77456467 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTTT CCCATCCCGT CGCGGTCATC ACCAGCGACG AGCAAGCCCT GATCGTCGCC
AGCGACCTGG CCGAAGATTT CCAGCGCGAC AGCAACCTGC GCGACCGCGA ACGCCGGCTG
CCGCTGCCGG AGCTCGACGT GTTTTCCCGT TCCGGCCTGT GGGGCATCAG CGTGCCCAAG
GAGTACGGTG GCGCCGGCGT ATCCAACGTG ACCCTGGCCA AAGTCATCGC TTTGATCGCC
AGGGCCGATG GCTCGCTCGG GCAGATTCCA CAGAACCATT TTTATGCCCT GGAAGTGCTC
CGGGTGAACG GCAGCCACGA GCAGAAACAA CGTCTGTACG CCGAAGTCCT CGCCGGCCAG
CGTTTTGGCA ATGCCCTGGC AGAACTGGGC ACCAGGACCG CCCACGACCG TGTCACCCGC
CTCGAACGCG ACGGCAGCGG TTATCGCATC AACGGTCGCA AGTTCTATGC GACCGGCGCC
ATTTACGCCC AACGGATTCC AACGTCCGTG GTCGATGAAA ACGGCGTGCA GCAACTGGCG
TTCGTCCCGC GCGACAGCAA AGGTCTGACC GTGATCGACG ACTGGAGCGG CTTCGGCCAG
CGCACCACTG GCAGCGGTTC GGTGGTGTTC GAAAACGTGT ACGTCGCCGC CGAAGACGTC
ATTCCGTTCC AGAGCGCTTT CGAGCGCCCG ACCCCGGTCG GCCCGTTGGC GCAGATCCTT
CACGCCGCCA TCGACACCGG CATCGCCCGC GCCGCTTACG AAGACGCGTT GCACTTCGTG
CGCAGCAAGA CCCGTCCATG GATCGATTCG GGCAACGACA AAGCCACCGA AGACCCGCTG
ACCCTCAAGA GCTTCGGCCA CTTGAGCATT CGCCTGCACG CCACCGAAGC CCTACTCGAA
CGTGCCGGCG AATTCCTCGA CGCGGCCCAG GCCGAGACTA ACGCCGAGAC CGTTGCGGCA
GCCTCGATTG CCGTCGCCGA AGCACGGGCA ATCAGCACCG AAATCTCCCT GGCCGCCGGT
AGCACCCTGT TCGAACTGGC CGGCAGCCAG GCCACCCTGA TCGAGCACGG CCTCGACCGC
CACTGGCGCA ACGCCCGGGT ACACACCCTG CACGACCCGG TGCGCTGGAA GTATCACGCG
GTGGGCAATT ACTACCTCAA CGATGAAAAC CCGCCGCTGC GAGGGACCAT CTGA
|
|---|
| Protein sequence | MTFSHPVAVI TSDEQALIVA SDLAEDFQRD SNLRDRERRL PLPELDVFSR SGLWGISVPK
EYGGAGVSNV TLAKVIALIA RADGSLGQIP QNHFYALEVL RVNGSHEQKQ RLYAEVLAGQ
RFGNALAELG TRTAHDRVTR LERDGSGYRI NGRKFYATGA IYAQRIPTSV VDENGVQQLA
FVPRDSKGLT VIDDWSGFGQ RTTGSGSVVF ENVYVAAEDV IPFQSAFERP TPVGPLAQIL
HAAIDTGIAR AAYEDALHFV RSKTRPWIDS GNDKATEDPL TLKSFGHLSI RLHATEALLE
RAGEFLDAAQ AETNAETVAA ASIAVAEARA ISTEISLAAG STLFELAGSQ ATLIEHGLDR
HWRNARVHTL HDPVRWKYHA VGNYYLNDEN PPLRGTI
|
|---|
| |