Gene Pfl01_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0236 
Symbol 
ID3712089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp278306 
End bp279430 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content63% 
IMG OID 
ProductABC transporter-like 
Protein accessionYP_345969 
Protein GI77456464 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.127209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAG CCATCCAACG GCGACTGGAC CTTTCAGAGC CACCTGCGCT TGCGCAACGC 
ACCGAACTGC ATCCGGAACT GAACCGCGCT CATGTGCGTT TCGTCGGGCT CGGCAAAACC
TACGACGGCA AACAAGGCAC GGTCGCTGCC CTGCAAGGCA TCGACCTGGC GATCCAGCGC
GGTGAAGTGT TCGGCATCAT CGGCCGCAGC GGCGCCGGCA AGTCGTCGCT GATCCGCACC
ATCAACCGCC TCGAACAACC GACCTCGGGC CGGGTGCTGA TCGACCAGGT GGACATCGGC
GAATACGACG AGGATCGCCT CGTCGCCCTG CGGCGGCGGA TCGGCATGAT CTTCCAGCAC
TTCAACCTGA TGTCGGCGAA AACGGTGTGG CAAAACGTCG AACTGCCGCT GAAAGTCGCT
GGCGTTCCGA AGGAACAGCG GGAGAAAAAG GTTCGCGAAC TGCTGGAACT GGTGGGCCTG
CAAGCCAAGC ACACGGCGTA TCCGGCGCAG CTGTCCGGCG GGCAGAAACA GCGTGTCGGC
ATCGCCCGCG CGCTGGTGCA TGACCCGGAC ATTCTGCTCT GCGACGAAGC CACTTCGGCA
CTGGATCCGG AAACCACCCA GTCGATCCTC GGCCTGCTGC GCGAGATCAA CAAACGCCTG
GGCCTGACCA TCATGCTGAT CACCCACGAG ATGGCGGTGA TCCGGGAAAT CTGCGACCGC
GTCGTCGTAC TGGAACATGG CCGCATCGTC GAGCAAGGCC CGGTGTGGGA AGTGTTTGGC
AATCCACAGC ACGAAGTCAG CCAGACCTTG CTCGCACCGT TGCAGCACGC TTTGCCCGAA
GAATTGCAGA GCCGTTTGCA GGTGCAGCCG TCGTCGTCCG ATGCGTCAGT TGTGCTGCGT
TTGCAGTTCA CCGGCAGCCA GCAGGATGAG CCGGATCTGG CCGCGCTGTT CGCCGCGCTT
GGTGGCCGGG TGAAATTGCT CCAGGGCGGC GTGGAACGGA TCCAGGGCCA CGCGCTCGGG
CAACTGTTGC TGGCGGTCGC TGGTTCACAG CTGAATGCCG AGCAATTGCG TGAGCGTGCC
GGCCAATGGG CACAACGCAC GGAGGTGTTG GGTTATGTGG TTTGA
 
Protein sequence
MTAAIQRRLD LSEPPALAQR TELHPELNRA HVRFVGLGKT YDGKQGTVAA LQGIDLAIQR 
GEVFGIIGRS GAGKSSLIRT INRLEQPTSG RVLIDQVDIG EYDEDRLVAL RRRIGMIFQH
FNLMSAKTVW QNVELPLKVA GVPKEQREKK VRELLELVGL QAKHTAYPAQ LSGGQKQRVG
IARALVHDPD ILLCDEATSA LDPETTQSIL GLLREINKRL GLTIMLITHE MAVIREICDR
VVVLEHGRIV EQGPVWEVFG NPQHEVSQTL LAPLQHALPE ELQSRLQVQP SSSDASVVLR
LQFTGSQQDE PDLAALFAAL GGRVKLLQGG VERIQGHALG QLLLAVAGSQ LNAEQLRERA
GQWAQRTEVL GYVV