Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0121 |
Symbol | |
ID | 3717845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 128233 |
End bp | 130626 |
Gene Length | 2394 bp |
Protein Length | 797 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_345854 |
Protein GI | 77456349 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCCGG GCCTGAGCAT GGCGGCCAAT GCCAGCGAGG TCAGCAGCCA CCGCTACAAC ATCGCCGCCG GGCCATTGGG CGAGGCGCTG AACCAGTTCG CACGCCAAGC CGGCATCACC TTGTCGATGA CCCCACAGCA GACTCAAGGC CGACAATCAC CCGGCGTGCA GGGCGAGTAT TCGACCGATC AGGCGCTGAG TCATCTGCTC GGTGGTTCGG GTCTGGAGGC GGTCAGCCAG GACGGCAGCA GCTATGTGTT GCGCTCCGTC GCAGAAACCG AAGCACTGGC CCTGCCGACC ACCGACATCA AAGGCTTCGC CCTCGGCAAC GCGCTGGGCA GCATGGATGG CTATAACGCG ACGCACAGCC AGATCGCCAC CAAGACCAGT ACCGCGTTGC TGGAAACTTC GCAAAGCGTG TCCGTGGTCA CCCGTGAGCA AATGGATGAC CAGGGCTCGC AAACCGTGTC CCAAGCCATG CGTTACACCC CCGGCGTGCT GACCAATCCT TACGGCGCCA CGCACCGTTA CGACTACGTG GCAATGCGCG GCTTCAACGA CGGTTCGGTG GACAACATCT ACCTCGACGG CCTCAAGTCG ATGGGCGACA GCGGCACCTA CAGCACGATG CAGGTCGATC CGTATTTCCT CGAGCGCGTC GATATTCTCA AAGGCCCGTC GTCGGTACTT TACGGCCGTA GCTCGCCGGG CGGTCTGGTG GCGCTGACCA GCAAGAAGCC GCTGTACGAG GCCTATCACC AGGTTCAGGC CACCGTCGGC ACTCAGGGCC AGCGCGGTGT CGGTTTTGAC TTCAGCGGAC CGGTCGATGA CGACAAGCGC ATCGCCTATC GTCTGATCGG TTTGACGGAT CAGTCCGACA CGCAATTCGA CCACAACAAG GAAAAGCGCT TCGCCCTCGC GCCGACCGTC AGCATCGATT TCAACGAGGA CACGTCGCTG ACGCTGCAAG CGTATCTGCA GCATGACCCG GATGGCGGCT ACCACGGTGG CGTGCCGGCC GACGGTACGA TTCATCAGCG CAACGGCAAT CGCATTTCGC CGCATTTCTT CGAAGGCGAG CCGGGCATCG ATGGCTACTC CCGTGATCAG CAGTCGTTCG GTTACCAGTT CGAACACCGC TTCAACGACG TCTTCACCGC GCGGCAGAAT TTCCGCTACC TCGACTCCAA AGTGAACATG GATCAGGTGT ACGCCTATGG CTGGACGTCG CCGACCAGTA ACGAACTGAA TCGCTACTAC ACCGGCGGTG ACGAGCGTCT CCACGCGTTC ATCGTCGACA ACATGCTCCA GGCCGAATTT TTCACCGGAG CGACCAAGCA CACAGTGTTG ATGGGAGCGG ATTATCAGCG ACGCAAAACC GTGGTCGACT GGACCAGTGG CGGCCTGGCG CCGATCAACG CGTTCAACCC GGAGTCTGGC AATTCCGCTA TCACGCCTTA CGGCGAGACC AGCTATTTGC GGCGCCTGGA GCAGACCGGC GTTTACCTGC AAGACCTGAT CGAGATGAAC AAGTGGCGCT TCTCGCTGGG ACTGCGTCAG GACTGGGTGG AAACCTCCGA CGAAAACCGT ATCGCCGAAG CGGGCCGTCC GGTCGGCACC GAGATCAATG ATCGACGCAC CAAGCTCACC GGCCGTGCCG GCGCGCTGTA TCTGTTCGAT AACGGGCTCG CGCCGTACGT CAGCTATTCC GAGTCGTTCA ACCCGAATTC CTACGCTGAC AGCGCCGGCA ATCCACTCGC ACCGACCGAT GGAACGCAGT GGGAAATGGG CCTGAAGTAT CAGCCGCCGG GTACTGACAA TCTGTTCACC GCCTCGTTGT TCCGCATCGA TCAGGAGAAC CTGGCGACCA AACTGCCGCA GGAAAACTTC TATCGCGCTG TAGGCGCTGT CCGCTCTCAG GGTCTGGAAC TGGAAGCGCA CATGCAGCTG ACCGACAACC TCAAAGTCCT CGGCAGCTAC ACCTTTACCG ACATTGAATA CTCGAAGTCG ATGACCAGCA CCTTGAGCAC ACCGACCAAT GTGATCGAGA ACAAAGGCAA CTCGCCAACC CAGGCGCCAC GGCACATGGC ATCGCTGTGG GCCGACTACA AGTTCGACAG CGCGGCACTC GACGGGCTGC GACTGGGCGG TGGTGTACGT TATGTCGGCT ATAGCTGGGC GGATGCAGAG AACACCATGA AGGTGCCGTC CTACACATTG TTCGACGCAT CGATTGGCTA TGACCTCGGC AAGGTCGGTC TGAAGGGTGT CGACGTACGC CTGAATGCGA ACAATCTGAC CAACGAATCC TACGTAGCCT CCTGCGCCAG TCTGGACTTC TGCTACATGG GCGAAGAGCG CAACGTCGCC GCCACGGTCA GTTACCAGTT CTAA
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Protein sequence | MLPGLSMAAN ASEVSSHRYN IAAGPLGEAL NQFARQAGIT LSMTPQQTQG RQSPGVQGEY STDQALSHLL GGSGLEAVSQ DGSSYVLRSV AETEALALPT TDIKGFALGN ALGSMDGYNA THSQIATKTS TALLETSQSV SVVTREQMDD QGSQTVSQAM RYTPGVLTNP YGATHRYDYV AMRGFNDGSV DNIYLDGLKS MGDSGTYSTM QVDPYFLERV DILKGPSSVL YGRSSPGGLV ALTSKKPLYE AYHQVQATVG TQGQRGVGFD FSGPVDDDKR IAYRLIGLTD QSDTQFDHNK EKRFALAPTV SIDFNEDTSL TLQAYLQHDP DGGYHGGVPA DGTIHQRNGN RISPHFFEGE PGIDGYSRDQ QSFGYQFEHR FNDVFTARQN FRYLDSKVNM DQVYAYGWTS PTSNELNRYY TGGDERLHAF IVDNMLQAEF FTGATKHTVL MGADYQRRKT VVDWTSGGLA PINAFNPESG NSAITPYGET SYLRRLEQTG VYLQDLIEMN KWRFSLGLRQ DWVETSDENR IAEAGRPVGT EINDRRTKLT GRAGALYLFD NGLAPYVSYS ESFNPNSYAD SAGNPLAPTD GTQWEMGLKY QPPGTDNLFT ASLFRIDQEN LATKLPQENF YRAVGAVRSQ GLELEAHMQL TDNLKVLGSY TFTDIEYSKS MTSTLSTPTN VIENKGNSPT QAPRHMASLW ADYKFDSAAL DGLRLGGGVR YVGYSWADAE NTMKVPSYTL FDASIGYDLG KVGLKGVDVR LNANNLTNES YVASCASLDF CYMGEERNVA ATVSYQF
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