Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0120 |
Symbol | |
ID | 3717844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 126979 |
End bp | 128157 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | PepSY-associated TM helix |
Protein accession | YP_345853 |
Protein GI | 77456348 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.620261 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCGT TTCTGGTTTT ATTGCACCGG TATATCGGGT TGGCCACGGC GGTTTTTCTG CTGCTGGCGG GGATTACCGG CAGCATTCTG GCATTCAATC ATGAGCTGGA TGAGTGGTTG AATCCGGAGT TTTACGCGGC GTCGGCCGAG GGGGAGCGCC TAGCGCCAGG CGAGCTGGTT GATGCGCTGC AATCGGCACA TCCGAAGTTG CAGGTCTGGT ACATGGAGTA CCCGAATGAG GCAGGCCACA CGGCATTGCT CGCGGCGGTT GCGCGGAATG GTCCGGCGAC CGGCGAACCG TTTGAAGAAC GCAATCAAGT GTTCTATCTC GACCCGGTCA ATGGCGAGCA AAAGGGCCAG CGTTACTGGG GCGAATGCTG TTTCCAGCGT GAGAACTTCG TTCCGTTCAT TCTCGAGTTC CACTACAACC TGACACTGCC CGGCAACTGG GGTTTGCTGT TGATGGGGTT GGTGGCCATC GCCTGGGTAA TCGATTGCTT CATCGCCCTC TGGCTGACGT TGCCGCGGGG TAAACCGTTC TGGAAGAAGT GGTCTATGGC CTGGAAGATC AAGGGCGGTC ATGCCTATCG ACTCAACTTC GATCTGCATC GGGCAGGGGG CTTGTGGCTG TGGTTGTTGT TGCTGCCGAT CGCCGTCAGC AGCGTGGCGA TGAACCTGCC GAGCCAGGTT TTCAAACCGG TGGTGTCGTT GTTTTCTCCG ATTGAACCGA GCGTGTATGA GGCGCGGGGG CGGATGCCTG CCGAAGAACT GGGGATCACC CGATTGAGTT ATCAACAGGC ATACGAAAGG GCACAGCAGG AGGGGAAAAG GTTGGGGCTG ACAGCGGCGA TCGGCGAGTT GTATTACAGC TTTGAGTACA ACTTCTACGG AGCGGGGTTT GGAGAGCATG ACACCGAGGC CCACGGTAAA TCCTGGTTGT TCTTCCACGG TACTGACGGA CGATTACTGG GGCAGGAGAT CGCAGGAGAA GGGACGTTGG GAGAGCGGTT TTATCGGTTG CAATTGCCGA TACATGGGGG ACGGATCATA GGCTTCACCG GGCAAGTGAT GATCGCGATA TTGGGTGTTC TGATTGCGGG GTTGTCGGGG ACTGGCGTCT ACATCTGGTG GCGCAAGTGG CAGGCTCGTC GGTGCAGCAT GGCACGCAGA GCGGGTTGA
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Protein sequence | MRSFLVLLHR YIGLATAVFL LLAGITGSIL AFNHELDEWL NPEFYAASAE GERLAPGELV DALQSAHPKL QVWYMEYPNE AGHTALLAAV ARNGPATGEP FEERNQVFYL DPVNGEQKGQ RYWGECCFQR ENFVPFILEF HYNLTLPGNW GLLLMGLVAI AWVIDCFIAL WLTLPRGKPF WKKWSMAWKI KGGHAYRLNF DLHRAGGLWL WLLLLPIAVS SVAMNLPSQV FKPVVSLFSP IEPSVYEARG RMPAEELGIT RLSYQQAYER AQQEGKRLGL TAAIGELYYS FEYNFYGAGF GEHDTEAHGK SWLFFHGTDG RLLGQEIAGE GTLGERFYRL QLPIHGGRII GFTGQVMIAI LGVLIAGLSG TGVYIWWRKW QARRCSMARR AG
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