Gene Pfl01_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0120 
Symbol 
ID3717844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp126979 
End bp128157 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content58% 
IMG OID 
ProductPepSY-associated TM helix 
Protein accessionYP_345853 
Protein GI77456348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.620261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCGT TTCTGGTTTT ATTGCACCGG TATATCGGGT TGGCCACGGC GGTTTTTCTG 
CTGCTGGCGG GGATTACCGG CAGCATTCTG GCATTCAATC ATGAGCTGGA TGAGTGGTTG
AATCCGGAGT TTTACGCGGC GTCGGCCGAG GGGGAGCGCC TAGCGCCAGG CGAGCTGGTT
GATGCGCTGC AATCGGCACA TCCGAAGTTG CAGGTCTGGT ACATGGAGTA CCCGAATGAG
GCAGGCCACA CGGCATTGCT CGCGGCGGTT GCGCGGAATG GTCCGGCGAC CGGCGAACCG
TTTGAAGAAC GCAATCAAGT GTTCTATCTC GACCCGGTCA ATGGCGAGCA AAAGGGCCAG
CGTTACTGGG GCGAATGCTG TTTCCAGCGT GAGAACTTCG TTCCGTTCAT TCTCGAGTTC
CACTACAACC TGACACTGCC CGGCAACTGG GGTTTGCTGT TGATGGGGTT GGTGGCCATC
GCCTGGGTAA TCGATTGCTT CATCGCCCTC TGGCTGACGT TGCCGCGGGG TAAACCGTTC
TGGAAGAAGT GGTCTATGGC CTGGAAGATC AAGGGCGGTC ATGCCTATCG ACTCAACTTC
GATCTGCATC GGGCAGGGGG CTTGTGGCTG TGGTTGTTGT TGCTGCCGAT CGCCGTCAGC
AGCGTGGCGA TGAACCTGCC GAGCCAGGTT TTCAAACCGG TGGTGTCGTT GTTTTCTCCG
ATTGAACCGA GCGTGTATGA GGCGCGGGGG CGGATGCCTG CCGAAGAACT GGGGATCACC
CGATTGAGTT ATCAACAGGC ATACGAAAGG GCACAGCAGG AGGGGAAAAG GTTGGGGCTG
ACAGCGGCGA TCGGCGAGTT GTATTACAGC TTTGAGTACA ACTTCTACGG AGCGGGGTTT
GGAGAGCATG ACACCGAGGC CCACGGTAAA TCCTGGTTGT TCTTCCACGG TACTGACGGA
CGATTACTGG GGCAGGAGAT CGCAGGAGAA GGGACGTTGG GAGAGCGGTT TTATCGGTTG
CAATTGCCGA TACATGGGGG ACGGATCATA GGCTTCACCG GGCAAGTGAT GATCGCGATA
TTGGGTGTTC TGATTGCGGG GTTGTCGGGG ACTGGCGTCT ACATCTGGTG GCGCAAGTGG
CAGGCTCGTC GGTGCAGCAT GGCACGCAGA GCGGGTTGA
 
Protein sequence
MRSFLVLLHR YIGLATAVFL LLAGITGSIL AFNHELDEWL NPEFYAASAE GERLAPGELV 
DALQSAHPKL QVWYMEYPNE AGHTALLAAV ARNGPATGEP FEERNQVFYL DPVNGEQKGQ
RYWGECCFQR ENFVPFILEF HYNLTLPGNW GLLLMGLVAI AWVIDCFIAL WLTLPRGKPF
WKKWSMAWKI KGGHAYRLNF DLHRAGGLWL WLLLLPIAVS SVAMNLPSQV FKPVVSLFSP
IEPSVYEARG RMPAEELGIT RLSYQQAYER AQQEGKRLGL TAAIGELYYS FEYNFYGAGF
GEHDTEAHGK SWLFFHGTDG RLLGQEIAGE GTLGERFYRL QLPIHGGRII GFTGQVMIAI
LGVLIAGLSG TGVYIWWRKW QARRCSMARR AG