Gene Pfl01_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0112 
Symbol 
ID3717811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp114025 
End bp115458 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content61% 
IMG OID 
ProductNAD(P) transhydrogenase, beta subunit 
Protein accessionYP_345845 
Protein GI77456340 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGA ACCTCGTCAC GACGCTCTAC CTGATCGCAT CGATCTGCTT CATCCAGGCC 
CTCAAAGGCC TGTCGCACCC GACCACGTCG CGCCGCGGCA ACCTGTTCGG CATGCTCGGC
ATGGCGCTGG CAATCATCAC CACGATCGGC CTCATCTATA AGCTGGGCGC TGAGCTGGCG
ACCGCAGGCA TCGGTTATGT AATCGTCGGC CTGCTGATCG GCGGCACCGC CGGTTCGATC
ATGGCCAAGC GCGTTGAAAT GACCAAGATG CCGGAACTGG TTGCGTTCAT GCACAGCATG
ATCGGCCTGG CAGCGGTGTT CATCGCCATT GCGGCCGTGG TCGAGCCGCA GTCGCTGGGC
ATCGTCAAGC AACTGGGCGA CTCGATCCCG GCGGGTAACC GTCTGGAGCT GTTCCTCGGC
GCAGCCATCG GTGCAATCAC CTTCTCCGGT TCGGTGATCG CTTTCGGCAA GCTGTCGGGC
AAGTACAAGT TCCGTCTGTT CCAGGGTGCA CCGGTACAGT TCAGCGGTCA GCACAAGCTG
AACGCAGTAC TGGGTCTGGC GACGCTGATC CTCGGCGTCA CTTTCATGCT GACCGGCAAC
CTCGCCGCGT TCGCACTGAT GCTGGCCCTG GCGTTCGTCA TGGGCGTGCT GATCATCATC
CCGATCGGCG GCGCCGACAT GCCAGTGGTG GTGTCGATGC TCAACAGCTA TTCCGGCTGG
GCGGCGGCGG GTATCGGCTT CTCGCTGAAC AACTCGATGC TGATCATTGC AGGTTCGCTG
GTGGGTTCGA GCGGTGCGAT CCTCTCGTAC ATCATGTGCA AGGCGATGAA CCGTTCCTTC
TTTAATGTAC TGCTCGGCGG TTTCGGCAAT ACAGCAGACG CCGGTCCTGC CGGCGAGAAA
GAAGCCCGTC CGGTGAAATC CGGTTCGGCT GACGACGCGA CTTTCCTGCT GACCAACGCT
GACACCGTGA TCATCGTTCC GGGTTACGGC CTGGCGGTGG CTCGCGCGCA GCATGCCCTG
AAAGAGCTGA CCGAGAAGCT GACCCACCAC GGCGTGACCG TGAAGTACGC GATCCACCCG
GTGGCCGGTC GGATGCCTGG CCACATGAAC GTACTGTTGG CCGAGGCCGA AGTGCCGTAC
GACCAGGTGT TCGAAATGGA AGACATCAAC TCCGAGTTCG GCCAGGCCGA CGTGGTGCTG
GTGCTCGGCG CCAACGACGT GGTCAACCCG GCCGCCAAGA ACGATCCGAA ATCGCCGATT
GCCGGCATGC CGATCCTCGA AGCGTTCAAG GCCAAGACCA TCATCGTCAA CAAGCGCTCG
ATGGCCAGCG GCTATGCCGG CCTGGACAAC GAACTGTTCT ATCTGGACAA GACCATGATG
GTGTTCGGCG ACGCGAAAAA AGTCATCGAA GACATGGTCA AAGCGGTCGA GTAA
 
Protein sequence
MSMNLVTTLY LIASICFIQA LKGLSHPTTS RRGNLFGMLG MALAIITTIG LIYKLGAELA 
TAGIGYVIVG LLIGGTAGSI MAKRVEMTKM PELVAFMHSM IGLAAVFIAI AAVVEPQSLG
IVKQLGDSIP AGNRLELFLG AAIGAITFSG SVIAFGKLSG KYKFRLFQGA PVQFSGQHKL
NAVLGLATLI LGVTFMLTGN LAAFALMLAL AFVMGVLIII PIGGADMPVV VSMLNSYSGW
AAAGIGFSLN NSMLIIAGSL VGSSGAILSY IMCKAMNRSF FNVLLGGFGN TADAGPAGEK
EARPVKSGSA DDATFLLTNA DTVIIVPGYG LAVARAQHAL KELTEKLTHH GVTVKYAIHP
VAGRMPGHMN VLLAEAEVPY DQVFEMEDIN SEFGQADVVL VLGANDVVNP AAKNDPKSPI
AGMPILEAFK AKTIIVNKRS MASGYAGLDN ELFYLDKTMM VFGDAKKVIE DMVKAVE