Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0056 |
Symbol | |
ID | 3717696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 61047 |
End bp | 63854 |
Gene Length | 2808 bp |
Protein Length | 935 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | DNA polymerase I |
Protein accession | YP_345789 |
Protein GI | 77456284 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAG CCCCCCTCGT CCTGGTGGAC GGTTCGTCTT ACCTGTACCG CGCCTTTCAC GCGCTGCCAC CGCTGACCAC CTCCAAAGGC CTGCCGACCG GTGCGGTCAA AGGCGTGCTG AACATGCTCA AGAGCCTGCG CAAGCAGTAT CCGGACAGCC CGTTCGCGGT AGTGTTCGAC GCCAAGGGTG GGACATTTCG CGATGAGATG TACGCCGAAT ACAAGGCCAA CCGCCCAAGC ATGCCGGACG ACATGCGCGT GCAGATCGAG CCGCTGCACC AGAGCGTGAT CGCCCTCGGT TTCCCGCTGC TGTGCGTCGA AGGCGTCGAG GCCGATGACG TGATCGGCAC CCTGGCCCGC AGCAGCGCGG CCGCCGACCG CCCGGTGATC ATCTCCACCG GCGACAAGGA CATGGCGCAA CTGGTCGACG GCCACATTAC CTTGGTCAAC ACCATGTCCG GTAGTTCGAT GGATGTGGAC GGCGTGAAGG AGAAATTCGG CGTCGCTCCA GAGCAGATCA TCGATTATCT GGCCCTGATG GGCGATTCCT CCGACAACAT CCCGGGCGTT CCCGGCATCG GCCCGAAAAC CGCGTCCGGC CTGCTGGTGG GCGTCAACGG CGGTCTGACC GAGCTGTATG CGCAGCTCGA CATCGTGCCG ACCCTGCCGA TTCGTGGCGC CAAGACCCTG CCGGCCAAGC TCGAAGAACA CAAGGAAATG GCCTTCCTCT CCTATCAACT GGCGACCATC AAGGTCGACG TGCCGCTGGA TATCGGCCTC GACGACCTGC AAATGGGTCC GGAAGATCCG GCCAAGCTTT ACGAGTTGTA CACCCTGCTG GAATTCAAGA GTTGGCTGAA TGACCTGGAT CGCGATGCCA AGCGCCAGGA ACTGAGCGCG GCCGCCGAGC CTGTGCCGGC CGGTGATCTG TTCAGCGCGC CTGCCGAAGA GGAAGCGCCC GCCGCTCCGG CTGAAGCCGC GTACGAAACC ATCCTCGATC AGGCGCGATT CGACGTTTGG CTGGAAAAGC TGAAGAACGC CAAACTGTTC GCCTTCGACA CCGAAACCAC CGGCATCGAC GCGCAACAGG CGCAGCTGGT CGGCTTGTCC TTCGCGGTGC AGGCCAACGA AGCGGCCTAC ATCCCGCTGA CCCACTCCTA CATCGGCGTG CCGGAGCAGC TGGATCGCGA CACTGTGCTG CGCGCACTCA AGCCGATCCT TGAAGACCCG AACAAGCTCA AGGTCGGCCA GCACGCCAAG TTCGACATGA ACATCCTGGC CAACTGCGCC ATCGGTGGCG ATCAGAACGA AGGCATCACC GTGCGCGGAA TTGCCTTCGA CACGATGCTT GAGTCCTATG TGCTCAACTC CACCGCCACC CGCCACGACA TGGACAGCCT AGCGCAGAAG TACCTGGATC ACACCACCGT GAGTTTTCAG GACATCGCCG GCAAAGGCGC CAAGCAACTG ACCTTCGACC AGATCGCCCT GGAACAGGCC GGGCCGTATG CCGCCGAAGA TGCCGACGTG ACCCTGCGCC TGCACCAGAC GCTGTTCGAC AAGCTCAGCG CTATCCCGAG CCTGGCGAGT GTACTGACCG ATATCGAGAT CCCGCTGGTG CCAGTGCTTG CTCGCATCGA GCGCCAGGGC GCGTTCGTCG ACGCTGAACT GCTCGGCATC CAGAGCATTG AACTGGGTAA CAAAATGATC GCGCTGGAGC GTGAAGCCTT CGAGATTGCC GGTGAAGAAT TCAACCTCGG TTCGCCGAAG CAGCTGGGCG TGATCCTCTA CGAAAAACTT GGCCTGCCGG TGCTGAAGAA GACCGCCAAG GGCCAGCCGT CCACCGCCGA AGAAGTGTTG GCGAAACTGG CCGAAGACGA TCACCGCTTG CCGAAAGTGC TGATGGAACA CCGTTCCATG AGCAAGCTGA AAAGCACCTA CACCGATCGC CTGCCGGAGC AGATCAACCC GCGTACCGGG CGTATCCACA CTTCGTACCA TCAGGCCGTT GCGTCGACCG GTCGCTTGTC GTCGAGCGAT CCGAACCTGC AGAACATCCC GGTGCGCACC GCCGAAGGCC GACGCATCCG TCAGGCGTTC GTTGCGCCGA AAGGTTACAA ACTGCTGGCA GCGGACTACT CGCAGATCGA ACTGCGGATC ATGGCCCACC TGTCCCGCGA CGAAGGCCTG ATGAATGCTT TCCGCAATAA CCTGGACGTG CACACCGCCA CGGCGGCCGA AGTGTTCAAG GTCGAGCTGA ATGAAGTGAC GTCTGACCAG CGCCGGGGCG CCAAGGCGAT CAACTTCGGT CTGATCTACG GCATGGGCGC GCAGAAACTG GGCAAGGACA TCGGCGTCGA TACCAAGACC GCCAAGGCCT ACATCGACAC CTACTTCGCG CGTTATCCGG GCGTTCGCGA ATACATGGAT CGCACCCGCG CCCAGGCAGC AGACCAGGGC TTTGTGGAAA CGATCTTCGG TCGTCGCCTG TATCTGCCGG ACATCAACTC CAACAAGCCG CAGGAACGCG CGGCCGCCGA ACGCACGGCA ATCAACGCGC CGATGCAGGG CACCGCAGCG GACATCATCA AGAAAGCCAT GGTGGCAGTG GATAACTGGC TGTGCGCTTC CGGGCTGGAC GCCAAAGTCA TCCTGCAGGT GCACGACGAA CTGGTGCTGG AGGTCCGCGA GGATCTGGTC GATCAGGTTC GCGAAGAAAT TCGCGTGCAC ATGAGCGAAG CCGCGAAACT GGATGTGCCG TTGCTGGTGG AAGTGGGAGT CGGCAACAAC TGGGACGAGG CGCACTGA
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Protein sequence | MSQAPLVLVD GSSYLYRAFH ALPPLTTSKG LPTGAVKGVL NMLKSLRKQY PDSPFAVVFD AKGGTFRDEM YAEYKANRPS MPDDMRVQIE PLHQSVIALG FPLLCVEGVE ADDVIGTLAR SSAAADRPVI ISTGDKDMAQ LVDGHITLVN TMSGSSMDVD GVKEKFGVAP EQIIDYLALM GDSSDNIPGV PGIGPKTASG LLVGVNGGLT ELYAQLDIVP TLPIRGAKTL PAKLEEHKEM AFLSYQLATI KVDVPLDIGL DDLQMGPEDP AKLYELYTLL EFKSWLNDLD RDAKRQELSA AAEPVPAGDL FSAPAEEEAP AAPAEAAYET ILDQARFDVW LEKLKNAKLF AFDTETTGID AQQAQLVGLS FAVQANEAAY IPLTHSYIGV PEQLDRDTVL RALKPILEDP NKLKVGQHAK FDMNILANCA IGGDQNEGIT VRGIAFDTML ESYVLNSTAT RHDMDSLAQK YLDHTTVSFQ DIAGKGAKQL TFDQIALEQA GPYAAEDADV TLRLHQTLFD KLSAIPSLAS VLTDIEIPLV PVLARIERQG AFVDAELLGI QSIELGNKMI ALEREAFEIA GEEFNLGSPK QLGVILYEKL GLPVLKKTAK GQPSTAEEVL AKLAEDDHRL PKVLMEHRSM SKLKSTYTDR LPEQINPRTG RIHTSYHQAV ASTGRLSSSD PNLQNIPVRT AEGRRIRQAF VAPKGYKLLA ADYSQIELRI MAHLSRDEGL MNAFRNNLDV HTATAAEVFK VELNEVTSDQ RRGAKAINFG LIYGMGAQKL GKDIGVDTKT AKAYIDTYFA RYPGVREYMD RTRAQAADQG FVETIFGRRL YLPDINSNKP QERAAAERTA INAPMQGTAA DIIKKAMVAV DNWLCASGLD AKVILQVHDE LVLEVREDLV DQVREEIRVH MSEAAKLDVP LLVEVGVGNN WDEAH
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