Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0038 |
Symbol | |
ID | 3717474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 42299 |
End bp | 43102 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | ABC transporter-like |
Protein accession | YP_345771 |
Protein GI | 77456266 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.328477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.303335 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTCGTC TACCCCGCAC GCCCTCCGAG GCGGTGATCG AAGTTCGTGG CCTGTGCAAT CGCTTCGGCC ACCAGAGCGT GCACGAGAAC CTCGACCTCG ACTTGTACAA AGGCGAGATC CTGGCCGTGG TCGGCGGTTC CGGCAGCGGC AAGTCGGTGC TGCTGCGCAG CATCGTCGGC CTGCGCCGGC CCAGCGAAGG CATGGTCAAG GTGTTCGGCC AGAACCTGCC GAGCCTGCCG GAGCATGAGC GTTCGCTGAT CGAGCGGCGC TTCGGTGTGC TGTTCCAGAA GGGCGCGCTG TTCTCGTCGC TGACCGTCAC CGAGAACGTC GCCCTGCCCC TCATCGAACA CGCCGGGCTG AGCCGCGACG ACGCCGAACA TCTGGCGGCA GTGAAGCTGG CGCTGGCCGG GCTGCCGCTG TCGGCGGCGG ACAAGTACCC GGCCTCACTG TCCGGCGGCA TGATCAAGCG CGCGGCGCTG GCCCGGGCGC TGGCGCTGGA TCCGGACATC CTGTTTCTCG ACGAACCCAC CGCCGGCCTC GATCCGATTG GCGCGGCGCA GTTCGACCAA TTGATCCTGA CCCTGCGCGA CGCGCTGGGC CTGAGCGTGT TTCTGGTGAC CCACGACCTC GACACGCTCT ACACCATCAC CGACCGCGTC GCGGTACTGG CGCAGAAGAA AGTGCTGGTG GCGGGCCCCA TCGACGTGGT CTCGGAAACC GACGACGCGT GGATTCACGA ATACTTCCAC GGCCCTCGCG GCCGCTCGGC GCTGGACGCC GCCACACAGC TCAACGAGGT CTGA
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Protein sequence | MSRLPRTPSE AVIEVRGLCN RFGHQSVHEN LDLDLYKGEI LAVVGGSGSG KSVLLRSIVG LRRPSEGMVK VFGQNLPSLP EHERSLIERR FGVLFQKGAL FSSLTVTENV ALPLIEHAGL SRDDAEHLAA VKLALAGLPL SAADKYPASL SGGMIKRAAL ARALALDPDI LFLDEPTAGL DPIGAAQFDQ LILTLRDALG LSVFLVTHDL DTLYTITDRV AVLAQKKVLV AGPIDVVSET DDAWIHEYFH GPRGRSALDA ATQLNEV
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