| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0020 |
|---|
| Symbol | |
|---|
| ID | 3717639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 22437 |
|---|
| End bp | 22994 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | SUA5/yciO/yrdC-like |
|---|
| Protein accession | YP_345753 |
|---|
| Protein GI | 77456248 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0000304623 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAACA GTTGGCGTGT GCAACAAGCC GCACGAGAGA TTCGCGCCGG GGCGGTGATT
GCCTATCCAA CCGAAGCCGT CTGGGGGCTG GGGTGCGATC CTTGGAATGA AGAAGCGGTG
GATCGCCTGT TGGCGATCAA GAACCGTTCG GTGGACAAGG GCTTGATCCT GGTCGCCGAC
AACATTCGTC AGTTCGATTT TCTGTTCGAG GATTTCCCCC AGGACTGGAT CGACCGCATG
GCCAGCACGT GGCCGGGTCC GAACACCTGG CTGGTGCCGC ACCAGAACCT GCTGCCGGAA
TGGGTGACCG GGGTGCATGA CACCGTGGCG CTGCGGGTCA GCGATCATCC GCAGGTGCGG
GATCTGTGCT CGCTGGTGGG ACCGTTGATT TCGACGTCGG CCAACCCACA AGGGCGGCCT
GCGGCGCGAA CGCGCTTGCG GGTCGAGCAG TATTTCCGTG GTCAGGTCGA TCTGGTGCTC
GGCGGAGCGC TTGGCGGTCG CAAGAATCCG AGCCTGATTC GGGATCTGGC CACCGGCAAT
ATCGTGCGCC CGGCCTGA
|
|---|
| Protein sequence | MVNSWRVQQA AREIRAGAVI AYPTEAVWGL GCDPWNEEAV DRLLAIKNRS VDKGLILVAD
NIRQFDFLFE DFPQDWIDRM ASTWPGPNTW LVPHQNLLPE WVTGVHDTVA LRVSDHPQVR
DLCSLVGPLI STSANPQGRP AARTRLRVEQ YFRGQVDLVL GGALGGRKNP SLIRDLATGN
IVRPA
|
|---|
| |