Gene Pfl01_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0003 
SymbolrecF 
ID3717571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3246 
End bp4349 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content59% 
IMG OID 
Productrecombination protein F 
Protein accessionYP_345736 
Protein GI77456231 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000153172 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTAA GTCGCGTCTC GGTCACCGCG GTGCGCAATC TGCACCCGGT GACCTTCTCC 
CCCTCCCCCC GAATCAACAT TCTTTACGGC GCCAACGGCA GCGGCAAAAC CAGTGTTCTG
GAAGCCATTC ACCTGCTGGG GCTTGCCCGT TCGTTTCGTA GCACGCGGTT GTTGCCGGTC
ATCCAGTACG AGCAACTCGC CTGCACCGTG TTCGGTCAGG TTGAACTTGC CGAGGGTGGC
CATAGTGCAT TGGGGATATC CCGCGATCGT CAGGGCGAGT TCCAGATTCG CATTGACGGT
CAGAATGCAC GCAGTGCGGC ACAACTGGCG GAGATCCTGC CTCTGCAGTT GATCAACCCC
GATAGCTTTC GCCTGCTGGA GGGGGCGCCG AAGATTCGCC GGCAGTTCCT CGACTGGGGC
GTGTTCCACG TTGAACCGCG GTTCATGGCC ACCTGGCAGC GTTTGCAGAA GGCCTTGCGC
CAGAGAAACT CCTGGCTGCG GCATGGTACA CTTGACGCCG TTTCGCAAGC GGTTTGGGAC
AGGGAACTGT GCCAGGCCAG CGCTGAAATC GATGAATACC GCCGCGCTTA CATCAAAGCC
TTGAAACCAG TCTTTGAACA AACCTTGAGC GAACTGGTTG AGCTCGAAGG TTTGACGCTC
AGCTATTACC GAGGCTGGGA CAAAGACCGG GAATTGAGCG CTGTACTCGC CGGATCCGTG
CAACGGGACC AGCAGATGGG TCATACCCAG GCTGGGCCAC AACGGGCTGA CTTGCGTCTT
AGATTGGGCG CACACAACGC CGCGGACATC TTGTCCCGGG GGCAGCAGAA GTTGGTGGTC
TGTGCATTGC GGATTGCCCA GGGGCATCTG GTGAGTCAGG CCCGACGCGG CCAGTGTATT
TATCTGGTGG ATGACTTGCC GTCCGAACTG GACGAGAGCC ACCGTCGCGC GCTGTGCCGT
TTGCTGGAAG ACTTACGCTG CCAGGTTTTT ATCACCTGTG TAGATCACGA ATTACTGAGG
GAAGGCTGGC AGACGGAAAC GCCAGTCGCT CTGTTCCACG TGGAACAGGG CCGTATCACC
CAGACCCACG ACCATCGGGA GTGA
 
Protein sequence
MSLSRVSVTA VRNLHPVTFS PSPRINILYG ANGSGKTSVL EAIHLLGLAR SFRSTRLLPV 
IQYEQLACTV FGQVELAEGG HSALGISRDR QGEFQIRIDG QNARSAAQLA EILPLQLINP
DSFRLLEGAP KIRRQFLDWG VFHVEPRFMA TWQRLQKALR QRNSWLRHGT LDAVSQAVWD
RELCQASAEI DEYRRAYIKA LKPVFEQTLS ELVELEGLTL SYYRGWDKDR ELSAVLAGSV
QRDQQMGHTQ AGPQRADLRL RLGAHNAADI LSRGQQKLVV CALRIAQGHL VSQARRGQCI
YLVDDLPSEL DESHRRALCR LLEDLRCQVF ITCVDHELLR EGWQTETPVA LFHVEQGRIT
QTHDHRE