Gene Pfl01_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0002 
Symbol 
ID3717570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2128 
End bp3231 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content60% 
IMG OID 
ProductDNA polymerase III subunit beta 
Protein accessionYP_345735 
Protein GI77456230 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000396971 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTCA CCATTCAACG CGAAGCCCTG TTGAAACCCC TGCAACTGGT CGCAGGCGTC 
GTCGAGCGCC GACAGACCTT GCCGGTACTG TCCAACGTGC TGCTGGTTGT CGATGGCCAA
CAACTGTCGC TGACCGGTAC CGACCTGGAA GTCGAGCTGG TCGGTCGCGT GCAACTCGAG
GAGCCGGCTG AAACAGGTTC CATCACCGTG CCGGCGCGCA AGCTGATGGA CATCTGCAAG
AGCCTGCCGA ACGATGCGCT GATCGACATC AAGGTCGACG AGCAGAAGCT GGTGGTGAAA
GCCGGCCGTA GCCGCTTCAC CCTCTCGACG CTGCCGGCCA ACGACTTCCC GACTGTGGAA
GAAGGCCCGG GGTCGCTGAC TACCAGTCTG GAACAGAGCA AGCTGCGTCG CCTGATCGAA
CGCACCAGTT TCGCCATGGC CCAGCAGGAC GTGCGTTACT ACCTCAACGG CATGTTGCTG
GAAGTGTCGA CCGGTGTGAT CCGTGCCGTG GCTACCGACG GTCACCGTCT GGCCATGTGC
TCGATGCAGG CCGACATCGG CCAGCAGGAT CGCCACCAAG TGATCGTGCC GCGCAAAGGT
ATTCTTGAAC TGGCACGTCT GCTCACCGAG CCGGACGGCA ACGTCAGCAT CGTCCTGGGC
CAGCACCACA TCCGTGCGAC CACCGGCGAA TTCACCTTCA CCTCGAAACT GGTCGACGGC
AAGTTCCCGG ACTACGAGCG CGTTCTGCCA AAAGGTGGCG ACAAGCTGGT ACTGGGCGAT
CGTCAGGCGC TGCGTGAAGC GTTCAGCCGT ACCGCGATTC TGTCCAACGA GAAGTACCGC
GGTATCCGTC TGCAACTGGC CAGCGGTCAG TTGAAGATCC AGGCCAACAA CCCGGAGCAG
GAAGAAGCGG AAGAAGAAGT AGGCGTGGAA TACAACGGCG GCTCCCTGGA AATCGGCTTC
AACGTCAGCT ATCTGCTGGA CGTGCTGGGC GTGATGACCA CCGAGCAGGT TCGTCTGATC
CTGTCCGACT CCAACAGCAG TGCGCTGGTG CAAGAGTCCG ACAATGACGA TTCGGCTTAC
GTTGTCATGC CGATGCGTCT GTAA
 
Protein sequence
MHFTIQREAL LKPLQLVAGV VERRQTLPVL SNVLLVVDGQ QLSLTGTDLE VELVGRVQLE 
EPAETGSITV PARKLMDICK SLPNDALIDI KVDEQKLVVK AGRSRFTLST LPANDFPTVE
EGPGSLTTSL EQSKLRRLIE RTSFAMAQQD VRYYLNGMLL EVSTGVIRAV ATDGHRLAMC
SMQADIGQQD RHQVIVPRKG ILELARLLTE PDGNVSIVLG QHHIRATTGE FTFTSKLVDG
KFPDYERVLP KGGDKLVLGD RQALREAFSR TAILSNEKYR GIRLQLASGQ LKIQANNPEQ
EEAEEEVGVE YNGGSLEIGF NVSYLLDVLG VMTTEQVRLI LSDSNSSALV QESDNDDSAY
VVMPMRL