| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4615 |
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| Symbol | trmE |
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| ID | 8533065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 5059405 |
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| End bp | 5060769 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_003261910 |
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| Protein GI | 261823804 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.394021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATA CCGATACCAT CGTCGCCCAA GCCACGCCAC CGGGACGCGG AGGTGTGGGT
ATTTTACGCG TTTCAGGACG GGCAGCCGCA GAGGTGGCAC ATGCCATTCT GGGTAAACTT
CCTAAGCCTC GTCACGCCGA TTATCTGCCG TTCCGTGATA CCAACGGCAC CACGCTTGAT
CAGGGCATCG CCCTCTGGTT CCCTGGCCCG AATTCCTTTA CCGGTGAAGA CGTGCTGGAA
CTTCAAGGCC ACGGCGGCCC GGTTATTCTT GATTTGCTCC TGCAACGCAT TCTGACCCTG
CCCAACGTGC GCATTGCGCG TCCCGGCGAA TTTTCTGAAC GCGCCTTCCT GAACGATAAG
CTCGATCTCG CGCAGGCAGA AGCCATCGCC GATCTGATTG ACGCCAGCTC GGAACAGGCC
GCTCGCTCAG CGCTGAACTC TCTGCAAGGC GTATTCTCTA CCCGTATAAA TCAGTTAGTG
GAAGCACTTA CTCACCTGCG AATCTACGTC GAGGCTGCCA TCGACTTCCC AGATGAAGAG
ATCGACTTTC TCTCCGATGG CAAAATTGAA GCGCAGCTAA ATGGTGTGAT GGCCGATCTG
GATGCCGTTC GAGCCGAAGC GCATCAGGGT AGCCTGCTGC GTGAAGGGAT GAAGGTGGTG
ATTGCGGGTC GCCCTAATGC GGGTAAATCC AGCTTACTCA ATGCGTTAGC CGGTCGTGAA
GCCGCAATCG TCACCGCAAT CGCGGGAACC ACTCGCGACG TATTACGTGA ACACATTCAT
ATCGACGGCA TGCCGTTACA TATCATCGAC ACCGCCGGGC TGCGCGATGC CAGCGACGAG
GTCGAACGCA TTGGCATTGA ACGCGCCTGG CAGGAAATCG AACAGGCCGA CCGCGTGCTG
TTCATGGTCG ATGGCACCAC CACGCAGGCG ACAGAACCAG AGCAGATCTG GCCCGAATTT
ATGGCACGCC TGCCAAAAAC ACTGCCGATT ACCGTGGTAC GCAACAAAGC GGACGTGACT
GGTGAAACGC TTGGCATCGA AGATGTGAAT ACTCACTCAC TTATCCGTCT TTCCGCCCGC
ACGGGTGAAG GTGTGGACAC GCTGCGCGAC CATCTCAAGC AAAGCATGGG GTTCACCAGC
AACACGGAAG GCGGTTTTCT GGCACGACGC CGTCATCTGC AAGCACTGGA ACTGGCAGCA
CAGCATTTGG TTCAAGGTAA AGAGCAGCTA GTAAGCGCTT ACGCTGGCGA ATTGCTGGCA
GAAGAACTGC GGCTGGCACA GCAGTCCTTG AGTGAAATCA CCGGCGAATT CACCTCTGAC
GACCTGCTAG GCCGTATCTT TTCAAGTTTT TGTATTGGGA AGTAG
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| Protein sequence | MSNTDTIVAQ ATPPGRGGVG ILRVSGRAAA EVAHAILGKL PKPRHADYLP FRDTNGTTLD
QGIALWFPGP NSFTGEDVLE LQGHGGPVIL DLLLQRILTL PNVRIARPGE FSERAFLNDK
LDLAQAEAIA DLIDASSEQA ARSALNSLQG VFSTRINQLV EALTHLRIYV EAAIDFPDEE
IDFLSDGKIE AQLNGVMADL DAVRAEAHQG SLLREGMKVV IAGRPNAGKS SLLNALAGRE
AAIVTAIAGT TRDVLREHIH IDGMPLHIID TAGLRDASDE VERIGIERAW QEIEQADRVL
FMVDGTTTQA TEPEQIWPEF MARLPKTLPI TVVRNKADVT GETLGIEDVN THSLIRLSAR
TGEGVDTLRD HLKQSMGFTS NTEGGFLARR RHLQALELAA QHLVQGKEQL VSAYAGELLA
EELRLAQQSL SEITGEFTSD DLLGRIFSSF CIGK
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