Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4607 |
Symbol | pgaB |
ID | 8533057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 5051746 |
End bp | 5053761 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | outer membrane N-deacetylase |
Protein accession | YP_003261902 |
Protein GI | 261823796 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATTCA TACGACTACG AAACTTTGTG ATGACGTTGG GGGTGTTAAT GATCACCGCC TGTACACATT CCGTCGACGT GAAATATAGC TCGCCAGCAG AGCGCCCTAC CTTGGTCAAA GAGCAGGCCT TGAAGGCCAA TCAATATATC GTTATTGCCT ATCATGATGT TGCAGATGAC GGTGCCGATC AGCGTTTCAT GGCGGTACGA ACTAATGCAC TTAATGAACA CTTTGCCTGG TTAAGGGAGA ATGGTTACCA CCCAGTATCC GTTGATGACA TTCTGGCTGC TGGCTCAGGG GGAAAACCGC TACCGGACAG GGCGGTATTA CTGACATTTG ATGATGGTTA CAGCAGTTTT TATTATCGTG TTTACCCTCT ACTGAAAGCC TATGGTTGGC CGGCGGTACT GGCGCCCGTA GGACGCTGGC TGGACACACC TGAAGATCAG CCGGTGGATT TTAGTGGTGT TCAAATACCT CGCAACCATT TTCTTACCTG GCAGCAAGTC GGTGAAATGG CGCAATCTGG CCTGGTAGAA ATTGGGGCTC ATACTTATGA CTTACATAAA GGGATTCAGG CAAACCCGCA GGGAAATATG GAACCGGCCG CTGCCGTTCG CCGCTATTTT CCAGAAGGTA AACGATACGA AACGCGAGAT GAGTACCGTC AACGTTTTGC GCATGATACT GACCTTATTA CTCAACGAAT CGCTGATGCT ACGGGGAAAA AACCTCGAGT TTGGGTTTGG CCCTATGGTG CGGTGGGGGG GGACGCGCTA AACATTGTTA AGCAGCGTGG CTATCAGCTA GCGCTAACGC TTGGAAGTGG GCCCGCGTCG GTTGACTCGC CGTATAACGT TCCCCGCATA CTGATTAACA ATAATCCTGA TGTACAACGG TTCGCGCTGT TGGTTAGCTA TGCCCGAGAA CCTGAGGTTA TACGGGTTGC ACATATCGAT CTGGATTATG TTTATGACAC CGATAAAGTG CAGCAGTCTC GTAATGTGGA TGCCTTAATT CAACGCATTG CCGACTTGCG TATTAATACC GTCTATCTTC AGGCTTTCTC CGATCCGAAG GGGGATGGCA ATGTACAGTC ACTCTATTTC CCTAATCGCT GGATGCCCGT TCGAGAAGAC TTATTCAATC ATGTGGCCTG GCAACTAGCC TCGCGGGCGC TTGTTCGTGT TTACGCCTGG ATGCCGGTGC TGGCTTTTGA TATGGATGAT GAGATGTTGC AGCGCGTTGA GCGGATCGAC AGTGAGAGCG GGCAACGTAG TATCAACTAC AGCCAATATC GGCGTTTATC GCTATGGGAT GCGGAGGCCA GAAAGCGAAT TACTGATATT TATGAGGATC TTTCCTCCTA CGCCACGTTT AGTGGCATCT TATTTCATGA TGATGCGGTG CTTGCAGACG ATGAAGACGC AAGCCATCAA GCCATACAGG CATATCGAGA GGCTGGATTC CCCGGCACGA TTGATGACAT TCGTCGCAAC CCCCAGCTTA CGGCACGCTG GACGCGGTTT AAAAGTAAGG CATTAACAGA TTTTACGCTC GATCTGGCCG CTCGTGTGCA TGAGATCCGC GGCCCGCAAG TCCAAACCGC GCGCAACATT TTCGCGCTCC CTGCTATTGA GCCAGAGAGT GAAGCATGGT TCTCCCAAAA TCTGGATGAC TTCCTTGCCG CTTATGACTG GGTTGCCCCC ATGGCAATGC CATTGATGGA AAACGTCGCG TCTAGGGACA GCGATGCGTG GCTGCAAAAA CTGGTACAGG AAGTGGCTCG CCGCCCCGGC GCGCTGAATA AAACAGTATT TGAACTTCAG GCAAGGGATT GGCGTGTCCC AGGAGAACCG TGGTTAGACA CCGCGCAATT GGTTAAATGG ATGACCGTGT TGCAACTGAA TGGTGCGCAA AATTACGGTT ATTATCCGGA TGATTTTCTT AATAATTCGC CTGAATTAGA GAGCATCCGT CCCATGATTT CATCAGAATG GTACCCACTG CCATGA
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Protein sequence | MSFIRLRNFV MTLGVLMITA CTHSVDVKYS SPAERPTLVK EQALKANQYI VIAYHDVADD GADQRFMAVR TNALNEHFAW LRENGYHPVS VDDILAAGSG GKPLPDRAVL LTFDDGYSSF YYRVYPLLKA YGWPAVLAPV GRWLDTPEDQ PVDFSGVQIP RNHFLTWQQV GEMAQSGLVE IGAHTYDLHK GIQANPQGNM EPAAAVRRYF PEGKRYETRD EYRQRFAHDT DLITQRIADA TGKKPRVWVW PYGAVGGDAL NIVKQRGYQL ALTLGSGPAS VDSPYNVPRI LINNNPDVQR FALLVSYARE PEVIRVAHID LDYVYDTDKV QQSRNVDALI QRIADLRINT VYLQAFSDPK GDGNVQSLYF PNRWMPVRED LFNHVAWQLA SRALVRVYAW MPVLAFDMDD EMLQRVERID SESGQRSINY SQYRRLSLWD AEARKRITDI YEDLSSYATF SGILFHDDAV LADDEDASHQ AIQAYREAGF PGTIDDIRRN PQLTARWTRF KSKALTDFTL DLAARVHEIR GPQVQTARNI FALPAIEPES EAWFSQNLDD FLAAYDWVAP MAMPLMENVA SRDSDAWLQK LVQEVARRPG ALNKTVFELQ ARDWRVPGEP WLDTAQLVKW MTVLQLNGAQ NYGYYPDDFL NNSPELESIR PMISSEWYPL P
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