Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4588 |
Symbol | |
ID | 8533038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 5031520 |
End bp | 5032251 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | transcriptional regulator PhoU |
Protein accession | YP_003261883 |
Protein GI | 261823777 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAATC TGAATCTGAA CAAACACATT TCCGGTCAGT TTAACGCCGA ACTGGAACAC ATCCGCACGC AGGTCCTGAC CATGGGCGGG CTGGTGGAGC AGCAACTGAG TGACGCGATT ACCGCGATGC ATAATCAGGA CGCGGAGCTG GCTCAGCAGG TAATTGAAGG CGATGCCAAA GTTAACATGA TGGAAGTGGC GATCGATGAA GCCTGCGTGC GCATTATTGC GAAACGTCAG CCCACCGCCA GCGATCTGCG TCTGGTGATG GCGATCATCA AAACCATCTC TGAACTGGAG CGTATCGGCG ACGTGGCGGA TAAAATCTGC CGCACCGCGC TGGAGAAATT CTCCCACCAG CATCAGCCGC TGTTGGTCAG CCTGGAATCA TTGGGCCGCC ACACCGTGCA GATGTTGCAT GATGTACTGG ATGCTTTTGC CCGAATGGAT CTGGACGAAG CGATCCGTAT TTATCGTGAA GATAAGAAAG TGGATAAAGA GTACGAAGGG ATTGTGCGTC AGTTGATGAC TCACATGATG GAAGATCCTC GTACTATCCC CAGCGTGCTG ACGGCACTGT TCTGCGCCCG TTCTATCGAA CGTATCGGCG ATCGTTGCCA GAACATCTGT GAATTTATCT TCTATTTTGT CAAAGGTCAG GATTTCCGCC ACCTTGGTGG TGATGCGCTG GAAAAACTGC TGGCTGAGAA AGACAGAAAA GCGGAAGAGT AA
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Protein sequence | MDNLNLNKHI SGQFNAELEH IRTQVLTMGG LVEQQLSDAI TAMHNQDAEL AQQVIEGDAK VNMMEVAIDE ACVRIIAKRQ PTASDLRLVM AIIKTISELE RIGDVADKIC RTALEKFSHQ HQPLLVSLES LGRHTVQMLH DVLDAFARMD LDEAIRIYRE DKKVDKEYEG IVRQLMTHMM EDPRTIPSVL TALFCARSIE RIGDRCQNIC EFIFYFVKGQ DFRHLGGDAL EKLLAEKDRK AEE
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