Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4534 |
Symbol | yieM |
ID | 8532984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 4977704 |
End bp | 4979182 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003261831 |
Protein GI | 261823725 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.432618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCACGC TGGAATCACT GGAAATGCTG CTGTCTATTG ATGAAAACGA GTTGTTGGAC GATCTTGTCG TCACGCTGCT GGCGACACCG CAGCTCGCTT TCTTCTTTGA AAAATATCCC AGCCTGAAAT CCGCGTTACT CAACGACCTC CCTCACTGGA AAGAAACCTT AAAGCAGCGC TTGCGCACCA CGCAGGTGCC GCCAGAGCTG GAAAAAGAAT TTAGCTGCTA CCAACGTTCA CAATCGATCG ACAACCAGGC ATTTCAGACA CGCCTGCCCG CGATTATGGA TACGCTGAAC AACGTGGAAT CACCGTTTTT GACACAGGCC TCACAGCTTA TTACCTCTCC AGAGAGAACT TTAGGGCAGA AGGTAACGAG TGGGCTCCAT GCGCTCTTTC TTCAGCGCTG GCGGCTGAGT CTGACACTGC AAACCATTTC ACTGCATCAG CAATTGATGG ATCAGGAGCG GGAAATTCTG CTGGATGAAT TGCAACAGCG CCTGACCCTT AGCGGTAAAC TCGAACCGAT TTTAGCGGAA AATGAAAACG CGGCCGGACG GCTCTGGGAT CTCAGCGCCG CACAGCGTAT TCACACCGAT CCCCGCTCTC TACTGGATTT CGGCGCTTTC CTGCAACGTC AGCCCGCATT GCAAAAACTG GCGGAACGCT TGGGCCGCAG CCGGGAGACC AAATCCATCC TCACCCAGGA AGCGCCACAA GAAGCCTTCC GGGTAAGAGT ACGGGAACCC GCCACCGTGC CCGAGCAGGT GAGCGGCGTG CATCAGAGCG ATGATATTTT GCGTCTGATG CCCACTGAGC TGGCAACGCT GGGCATCAGT GAACTGGAAT ACGAATTTTA TCGTCGTCTG TTGGAACACC GGCTACTGAC CTATCGCTTA CAGGGGGAGA GCTGGCGTGA GAAAATCACC GAGCGGCCAG TGGTTCACCA ACAAAACGAA CAGCAGCCGC GTGGCCCGTT TATTGTCTGC GTTGATACTT CAGGCTCCAT GGGTGGCTTT AATGAACGCT GTGCCAAAGC CTTCTGTCTG GCACTGATGC GCATCGCACT CGCTGACAAC CGCCGTTGCT ACATCATGTT ATTTTCTACC GGCGTGGTGA AGTATGAGCT GACGTCTGAA GACGGATTAG AACAGGCAAT ACGCTTTCTC AGCCAATCCT TCCGCGGCGG CACAGATATG AGCGCCTGTC TGTCAGCATT GTTGGATAAG ATGGACGATG CACTCTGGCA TGATGCCGAT GCGGTGGTGA TTTCAGATTT TATCGCCCAG CGATTGCCGG ATGAAGTGGT GAATAAGGTG AAAAGTCGTC AGAAGCAGCT ACAGCATCGT TTTCATGCTG TAGCGATGTC CGATCATGGC AAACCCGGCA TCATGCACAT CTTTGACCAT ATCTGGCGCT TTGATACCGG GTTAAAAAGC CGCTTAATGC GCCGCTGGCA GCACGGCAAG GCTTATTAA
|
Protein sequence | MITLESLEML LSIDENELLD DLVVTLLATP QLAFFFEKYP SLKSALLNDL PHWKETLKQR LRTTQVPPEL EKEFSCYQRS QSIDNQAFQT RLPAIMDTLN NVESPFLTQA SQLITSPERT LGQKVTSGLH ALFLQRWRLS LTLQTISLHQ QLMDQEREIL LDELQQRLTL SGKLEPILAE NENAAGRLWD LSAAQRIHTD PRSLLDFGAF LQRQPALQKL AERLGRSRET KSILTQEAPQ EAFRVRVREP ATVPEQVSGV HQSDDILRLM PTELATLGIS ELEYEFYRRL LEHRLLTYRL QGESWREKIT ERPVVHQQNE QQPRGPFIVC VDTSGSMGGF NERCAKAFCL ALMRIALADN RRCYIMLFST GVVKYELTSE DGLEQAIRFL SQSFRGGTDM SACLSALLDK MDDALWHDAD AVVISDFIAQ RLPDEVVNKV KSRQKQLQHR FHAVAMSDHG KPGIMHIFDH IWRFDTGLKS RLMRRWQHGK AY
|
| |