Gene Pecwa_4447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_4447 
Symbol 
ID8532890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp4871995 
End bp4873902 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content52% 
IMG OID 
ProductPTS system, mannitol-specific IIC subunit 
Protein accessionYP_003261746 
Protein GI261823640 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTCAC CAGATATTAA GATCAAGGTG CAAAACTTTG GTCGCTTCCT GAGTAATATG 
GTGATGCCCA ATATTGGCGC ATTTATCGCC TGGGGTATCA TTACCGCGCT GTTTATCCCA
ACGGGCTGGA TTCCCAATGA CACGTTGGCG AAGCTTGTTG GCCCGATGAT CACGTATTTG
CTGCCATTGC TGATTGGTTA TACCGGCGGA CGCTTGGTAT TTGGTGAGCG TGGTGGTGTA
GTGGGTGCAA TTACGACGAT GGGTGTGATC GTCGGAACCG ATATTCCGAT GTTCCTCGGC
GCGATGATCG TCGGTCCGTT GGGCGGCTGG ACGATCAAAC GTTTTGACCG CATGGTTGAC
GGTAAAATCA AAAGCGGCTT TGAAATGCTG GTCAACAACT TCTCTGCCGG TATTATCGGT
ATGTTGTTGG CGATCCTGTC ATTTTTGGCG ATTGGTCCGC TGGTTGAAGT CTTCTCTCAG
GTACTGGCTT CCGGCGTTAA CCTGATGGTA CAGAACAACC TGCTACCGTT TACGTCCATC
TTCGTTGAAC CTGCGAAAAT CCTGTTCCTG AACAACGCCA TCAACCACGG TATTTTCTCA
CCACTGGGCA TTCAGCAGGC GACGGAAACC GGGAAATCTA TTTTCTTCCT GATCGAAGCG
AACCCAGGTC CGGGCATGGG CGTGCTGATG GCTTACATGT TCTTCGGTCG TGGTAACGCG
AAAGAATCAG CACCAGGCGC GGCAATTATC CACTTCCTGG GTGGGATTCA TGAAATCTAC
TTCCCTTATG TGCTGATGAA TCCGCGCCTG ATTATCGCGG TTATTCTGGG CGGGATGACT
GGCGTGTTTA CGCTGAGCGT ATTAGGTGGT GGTTTGGTGT CACCTGCGTC TCCAGGTTCT
ATTCTGGCGG TGTTGGCGAT GACGCCAAAA GGCGCTTACT TCGCTAACCT GGCAGCGATT
GCCGCGGCTT TCGCGGTGTC CTTCATTGTG TCGGCGATTC TGCTGAAAAG TACCAAGCAA
AAAGAAGAAG ATCTGAGCGA CGCTACACGC CGCGTGCAGG AAATGAAAGC CTCTTCTAAA
GGCGCAGCGA CTAATACCGG TGTCAGCGGT GATATGAGCA CTGTGCGTAA AATCATCGTA
GCGTGTGACG CCGGTATGGG TTCCAGTGCG ATGGGTGCTG GCGTGTTGCG TAAGAAAGTT
CAGGATGCCG GGCTGACCAA TATTTCGGTG ACTAACAGCG CGATCAATAG CCTGCCGGAC
GATGTCGATC TGGTGATTAC GCACCGCGAT CTGACTGAGC GCGCAATGCG CCACGCGCCG
CAGGCACAGC ACATTTCTCT GACCAATTTC CTTGATAGCG GTCTGTATAG CGATCTGGCG
GCTCGTCTTG TGGCAGCGCA GGGTGCCGCG CAGCCTGAAA CCGTCGCGAC GCCTGCACCC
GTTGTAGCCG ATACGCAGAC GAACCTGTTC CAACTGGGCG CGGGTAATGT ATTCCTGAAT
CAACACGCGA CACATAAAGA GCAGGCAATC CGTTTTGCCG GTGAGCAACT GGTAAAAGGC
GGTTACGTCG AGCCTGAGTA TGTTGAAGCG ATGCTGGAAC GCGAAAAGCT GACCTCCACC
TATCTGGGCG AATCGATTGC TGTACCACAC GGTACGATTG AAGCGAAAGA CCGCGTGCTA
AAAACGGGCG TTGTCTTCTG CCAATATCCT GAAGGTGTTC GTTTTGGCGA TGAAGAAGAT
GAGGTTGCGC GTCTGGTTAT TGGTATCGCT GCCCGTAACA ACGAACATAT TCAGGTCATC
ACCAGTCTGA CTAACGCGCT GGATGATGAT GCGGTTATTG AACGTCTGGC ACACACTCAG
GACGTTCAGG AAGTGCTCGA CTTACTCTCT GGTAAAAAGA GTGCCTAA
 
Protein sequence
MLSPDIKIKV QNFGRFLSNM VMPNIGAFIA WGIITALFIP TGWIPNDTLA KLVGPMITYL 
LPLLIGYTGG RLVFGERGGV VGAITTMGVI VGTDIPMFLG AMIVGPLGGW TIKRFDRMVD
GKIKSGFEML VNNFSAGIIG MLLAILSFLA IGPLVEVFSQ VLASGVNLMV QNNLLPFTSI
FVEPAKILFL NNAINHGIFS PLGIQQATET GKSIFFLIEA NPGPGMGVLM AYMFFGRGNA
KESAPGAAII HFLGGIHEIY FPYVLMNPRL IIAVILGGMT GVFTLSVLGG GLVSPASPGS
ILAVLAMTPK GAYFANLAAI AAAFAVSFIV SAILLKSTKQ KEEDLSDATR RVQEMKASSK
GAATNTGVSG DMSTVRKIIV ACDAGMGSSA MGAGVLRKKV QDAGLTNISV TNSAINSLPD
DVDLVITHRD LTERAMRHAP QAQHISLTNF LDSGLYSDLA ARLVAAQGAA QPETVATPAP
VVADTQTNLF QLGAGNVFLN QHATHKEQAI RFAGEQLVKG GYVEPEYVEA MLEREKLTST
YLGESIAVPH GTIEAKDRVL KTGVVFCQYP EGVRFGDEED EVARLVIGIA ARNNEHIQVI
TSLTNALDDD AVIERLAHTQ DVQEVLDLLS GKKSA