Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4447 |
Symbol | |
ID | 8532890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4871995 |
End bp | 4873902 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | PTS system, mannitol-specific IIC subunit |
Protein accession | YP_003261746 |
Protein GI | 261823640 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTCAC CAGATATTAA GATCAAGGTG CAAAACTTTG GTCGCTTCCT GAGTAATATG GTGATGCCCA ATATTGGCGC ATTTATCGCC TGGGGTATCA TTACCGCGCT GTTTATCCCA ACGGGCTGGA TTCCCAATGA CACGTTGGCG AAGCTTGTTG GCCCGATGAT CACGTATTTG CTGCCATTGC TGATTGGTTA TACCGGCGGA CGCTTGGTAT TTGGTGAGCG TGGTGGTGTA GTGGGTGCAA TTACGACGAT GGGTGTGATC GTCGGAACCG ATATTCCGAT GTTCCTCGGC GCGATGATCG TCGGTCCGTT GGGCGGCTGG ACGATCAAAC GTTTTGACCG CATGGTTGAC GGTAAAATCA AAAGCGGCTT TGAAATGCTG GTCAACAACT TCTCTGCCGG TATTATCGGT ATGTTGTTGG CGATCCTGTC ATTTTTGGCG ATTGGTCCGC TGGTTGAAGT CTTCTCTCAG GTACTGGCTT CCGGCGTTAA CCTGATGGTA CAGAACAACC TGCTACCGTT TACGTCCATC TTCGTTGAAC CTGCGAAAAT CCTGTTCCTG AACAACGCCA TCAACCACGG TATTTTCTCA CCACTGGGCA TTCAGCAGGC GACGGAAACC GGGAAATCTA TTTTCTTCCT GATCGAAGCG AACCCAGGTC CGGGCATGGG CGTGCTGATG GCTTACATGT TCTTCGGTCG TGGTAACGCG AAAGAATCAG CACCAGGCGC GGCAATTATC CACTTCCTGG GTGGGATTCA TGAAATCTAC TTCCCTTATG TGCTGATGAA TCCGCGCCTG ATTATCGCGG TTATTCTGGG CGGGATGACT GGCGTGTTTA CGCTGAGCGT ATTAGGTGGT GGTTTGGTGT CACCTGCGTC TCCAGGTTCT ATTCTGGCGG TGTTGGCGAT GACGCCAAAA GGCGCTTACT TCGCTAACCT GGCAGCGATT GCCGCGGCTT TCGCGGTGTC CTTCATTGTG TCGGCGATTC TGCTGAAAAG TACCAAGCAA AAAGAAGAAG ATCTGAGCGA CGCTACACGC CGCGTGCAGG AAATGAAAGC CTCTTCTAAA GGCGCAGCGA CTAATACCGG TGTCAGCGGT GATATGAGCA CTGTGCGTAA AATCATCGTA GCGTGTGACG CCGGTATGGG TTCCAGTGCG ATGGGTGCTG GCGTGTTGCG TAAGAAAGTT CAGGATGCCG GGCTGACCAA TATTTCGGTG ACTAACAGCG CGATCAATAG CCTGCCGGAC GATGTCGATC TGGTGATTAC GCACCGCGAT CTGACTGAGC GCGCAATGCG CCACGCGCCG CAGGCACAGC ACATTTCTCT GACCAATTTC CTTGATAGCG GTCTGTATAG CGATCTGGCG GCTCGTCTTG TGGCAGCGCA GGGTGCCGCG CAGCCTGAAA CCGTCGCGAC GCCTGCACCC GTTGTAGCCG ATACGCAGAC GAACCTGTTC CAACTGGGCG CGGGTAATGT ATTCCTGAAT CAACACGCGA CACATAAAGA GCAGGCAATC CGTTTTGCCG GTGAGCAACT GGTAAAAGGC GGTTACGTCG AGCCTGAGTA TGTTGAAGCG ATGCTGGAAC GCGAAAAGCT GACCTCCACC TATCTGGGCG AATCGATTGC TGTACCACAC GGTACGATTG AAGCGAAAGA CCGCGTGCTA AAAACGGGCG TTGTCTTCTG CCAATATCCT GAAGGTGTTC GTTTTGGCGA TGAAGAAGAT GAGGTTGCGC GTCTGGTTAT TGGTATCGCT GCCCGTAACA ACGAACATAT TCAGGTCATC ACCAGTCTGA CTAACGCGCT GGATGATGAT GCGGTTATTG AACGTCTGGC ACACACTCAG GACGTTCAGG AAGTGCTCGA CTTACTCTCT GGTAAAAAGA GTGCCTAA
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Protein sequence | MLSPDIKIKV QNFGRFLSNM VMPNIGAFIA WGIITALFIP TGWIPNDTLA KLVGPMITYL LPLLIGYTGG RLVFGERGGV VGAITTMGVI VGTDIPMFLG AMIVGPLGGW TIKRFDRMVD GKIKSGFEML VNNFSAGIIG MLLAILSFLA IGPLVEVFSQ VLASGVNLMV QNNLLPFTSI FVEPAKILFL NNAINHGIFS PLGIQQATET GKSIFFLIEA NPGPGMGVLM AYMFFGRGNA KESAPGAAII HFLGGIHEIY FPYVLMNPRL IIAVILGGMT GVFTLSVLGG GLVSPASPGS ILAVLAMTPK GAYFANLAAI AAAFAVSFIV SAILLKSTKQ KEEDLSDATR RVQEMKASSK GAATNTGVSG DMSTVRKIIV ACDAGMGSSA MGAGVLRKKV QDAGLTNISV TNSAINSLPD DVDLVITHRD LTERAMRHAP QAQHISLTNF LDSGLYSDLA ARLVAAQGAA QPETVATPAP VVADTQTNLF QLGAGNVFLN QHATHKEQAI RFAGEQLVKG GYVEPEYVEA MLEREKLTST YLGESIAVPH GTIEAKDRVL KTGVVFCQYP EGVRFGDEED EVARLVIGIA ARNNEHIQVI TSLTNALDDD AVIERLAHTQ DVQEVLDLLS GKKSA
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