Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4393 |
Symbol | slmA |
ID | 8532836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 4814870 |
End bp | 4815466 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | nucleoid occlusion protein |
Protein accession | YP_003261692 |
Protein GI | 261823586 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000163426 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAAA AAGAAAATAC GAAAAGGAAT CGCCGCGAGG AAATTTTGCA GGCGCTGGCG CAGATGCTGG AATCCAGCGA CGGTAGCCAA CGCATCACCA CGGCAAAACT GGCTGCGAAC GTTGGCGTGT CCGAAGCGGC GCTCTACCGG CATTTCCCCA GTAAAACGCG GATGTTTGAT AGCCTGATTG AATTTATTGA GGATAGCCTG ACCACCCGCA TTAACCTGAT TCTGCAAGAC GAAAAAGAAA CGTTTAATCG TCTTCGTCTG ATTTTGCTGC TGATTTTAGG GTTTGCGGAA CGGAATCCTG GTCTGACTCG TATCATGACA GGTCACGCGC TGATGTTTGA ACAGGATCGC CTGCAGGGGC GTATTAACCA ACTGTTTGAG CGTATTGAAT CGCAGTTACG TCAGGTATTA CGCGAGCATA AGCTACGCGA TGGCAAAGGT TTCCAACATG ATGAAACGCT GTTGGCTAGC CAGTTATTAG CGTTTTGTGA AGGGATGCTG TCGCGCTTTA TTCGCTCTGA ATTCCGCTAT CGTCCGACGC AAGAATTCGA TACCCGCTGG CCGCTGTTGG CCGCACAGCT AAATTAA
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Protein sequence | MAEKENTKRN RREEILQALA QMLESSDGSQ RITTAKLAAN VGVSEAALYR HFPSKTRMFD SLIEFIEDSL TTRINLILQD EKETFNRLRL ILLLILGFAE RNPGLTRIMT GHALMFEQDR LQGRINQLFE RIESQLRQVL REHKLRDGKG FQHDETLLAS QLLAFCEGML SRFIRSEFRY RPTQEFDTRW PLLAAQLN
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