Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4390 |
Symbol | radC |
ID | 8532833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4812219 |
End bp | 4812884 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | DNA repair protein RadC |
Protein accession | YP_003261689 |
Protein GI | 261823583 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00436549 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTGGG AAAAGGGATT GGCACCGCGT GAAAAACTGG TGCGTTTAGG TGCGGAATCG CTGACGGATG CCGAACTGCT GGCGATTTTT CTACGCACAG GGCTACCCGG TGTGCATGTG ATGCAGTTGG CAGAGGGATT ATTGGCGCAG TTTGGGTCGC TCTATCAACT TATGATGGCC GATCAGTCTG CGTTTCACAG TGCCAGAGGT GTAGGAATAT CAAAATATAC GCAGCTTAAG GCGATCGCAG AGCTGTCGCG GCGGCTGTTT TTCTCCCGTC TGGCGAAAGA GGATGCGATG CTAAACCCGG AAGCGACCGG TCAATATCTG CAGTTGCTGC TGTCGCGACG TGAGCGCGAG GTTTTTTTAG TCCTGTTTTT GGATAATCAG CATCATGTTA TTCGCCATCA GGAGATGTTT GTTGGTACGA TTAACAGTGT GGAAGTACAC CCGCGTGAAA TTGTGCGTGA AGCGCTAAAG GCGAATGCCG CCGCGCTGAT TTTGGCGCAT AATCATCCGT CGGGAAAAGC GGAGCCGAGT CAGGCTGACC GTGCGATAAC CGAACAGATT GTCAAAGCGT GCCTGTTAAT GGAGATCCGC GTGCTCGATC ATTTAGTCAT TGGGCATGGC GAATACGTTT CTTTTGCCGA GCGTGGCTGG ATTTAA
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Protein sequence | MGWEKGLAPR EKLVRLGAES LTDAELLAIF LRTGLPGVHV MQLAEGLLAQ FGSLYQLMMA DQSAFHSARG VGISKYTQLK AIAELSRRLF FSRLAKEDAM LNPEATGQYL QLLLSRRERE VFLVLFLDNQ HHVIRHQEMF VGTINSVEVH PREIVREALK ANAAALILAH NHPSGKAEPS QADRAITEQI VKACLLMEIR VLDHLVIGHG EYVSFAERGW I
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