| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4355 |
|---|
| Symbol | |
|---|
| ID | 8532798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 4775597 |
|---|
| End bp | 4777219 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_003261654 |
|---|
| Protein GI | 261823548 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.31766 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATTTAG CGAATTGGCG TATCGGCTAT CGATTGGGAG GCGGGTTTGC CGTCCTGATT
CTGATGTTAT TTGCTGTGAG TCTATTTTCT CTGTCTAAAC TATCCGGCTT TCAGGATGGT
GCCAGAGACA TCGTCAAAGA GGTTTATCCA CAAACGGTAG ATGCTAATGA TCTCATCGAT
AACGTGAATG GGCATTTTGT CGCCTATTTG CAGATGATGT TGGTATCCGG TCAGGAACAG
CGTCAGGGAT ATGTCGATCG GATTATGGCG TACCGCAAGG AAATTAGCCG TCTGCTTGAT
AATCTGGAGA GCGATGCCTC AGGAGAGCGT TCCCGCAAGC AGGTGGGAGT TGTTCGCGGG
TTTCGTGCCG AGTTCATCAA GTCCGGTGAT CAAATTATCA GTGATGCGTT GGCGGGTAAT
AACGACGTCG CCATAGCAGA ATTCAATAAC ACCCTGAACG TGATTCAGCG CAATTACCGT
GACTCGGTGA AACAGTTGGT GAATTACCAG GACGAGGCGA TGAATACGTC TGTCGAAACC
ATGGCAGACG TATACAGCAG TACGCGTCTC ATTTTACTGC TTATCTTGGT GCTCGGCGCG
GCGGCTGGCG CACTGATTGC CTGGTTGATC ACCCGTAGCG TTACCCGTCC AATAGAGCAG
GCTTTGCATG TTGCAGATCG AGTGGCACAA GGCGACCTGA CCTCACACAT CACGGTGGCC
AGCAAGGATG AAACCGGGCT GCTGCTACAG TCGTTGGATC GCATGAATAC CAGCCTGAGC
TCGATTGTCG GCCAGGTACG TGACGGCGCA GAAACGATTT CGACGGCAGC GTCGCAAATC
ACGGCAGGGA ATCAGGATCT GTCATCGCGT ACAGAGGAAC AGGCCAGCTC GCTGGAAGAA
ACGGCAGCCT CGATGGAGCA ACTGGCATCT ACCATTAAAA ATACGGCGGA AAATACCCAG
CAGGCGACGG AGATTGCTAA TAAAGCCACG GGGGCGGCGA AACAAAGCGG TGAGGTAATG
CTTTCCGTCA CGCAGAAAAT GCGTGGGATA CACGATTCAT CCCAGCGTAT GGCAGAGATC
ATCGGTGTGA TCGACGGCAT TGCGTTCCAG ACCAACATTC TGGCGCTGAA CGCGGCGGTT
GAAGCGGCGC GTGCAGGTGA GCAGGGGCGC GGCTTTGCGG TGGTGGCAGG AGAAGTTCGC
TCGCTGGCGC AGCGTAGTGC GACAGCAGCA CGAGAAATCA AGGCTCTGAT TGATGATTCC
GTGGGCAAAA TCCGTGAAGG CATGGAGCTT GTCGATACCG CTGAAGAGAC GATGGGGGGA
TTAACGGCCC ACGTAAGAGA CGTACACGAC ATTATCAGTG AGATTTCACA GGCCAGCCGC
GAACAGAGTG ATGGTATTAA CCAGATGAAT CTGGCAATTG GACAAATTGA TACCACGACA
CAACAGAACG CGGCTCTGGT TGAAGAATCG GCTTCTGCGG CACAGTCTCT GCAATCACAG
GCAACTGTAC TGGCGGAAGC GGTGAGTGCG TTTAAAATAC AGTCGTATAG CCGTGGTAAC
GCTGCGTCTT ATGCCTCGAC GCCGGTGAGC ACACCCATGC TGGCGCTGGC AAATAAAGCG
TAA
|
|---|
| Protein sequence | MNLANWRIGY RLGGGFAVLI LMLFAVSLFS LSKLSGFQDG ARDIVKEVYP QTVDANDLID
NVNGHFVAYL QMMLVSGQEQ RQGYVDRIMA YRKEISRLLD NLESDASGER SRKQVGVVRG
FRAEFIKSGD QIISDALAGN NDVAIAEFNN TLNVIQRNYR DSVKQLVNYQ DEAMNTSVET
MADVYSSTRL ILLLILVLGA AAGALIAWLI TRSVTRPIEQ ALHVADRVAQ GDLTSHITVA
SKDETGLLLQ SLDRMNTSLS SIVGQVRDGA ETISTAASQI TAGNQDLSSR TEEQASSLEE
TAASMEQLAS TIKNTAENTQ QATEIANKAT GAAKQSGEVM LSVTQKMRGI HDSSQRMAEI
IGVIDGIAFQ TNILALNAAV EAARAGEQGR GFAVVAGEVR SLAQRSATAA REIKALIDDS
VGKIREGMEL VDTAEETMGG LTAHVRDVHD IISEISQASR EQSDGINQMN LAIGQIDTTT
QQNAALVEES ASAAQSLQSQ ATVLAEAVSA FKIQSYSRGN AASYASTPVS TPMLALANKA
|
|---|
| |