Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4234 |
Symbol | fadB |
ID | 8532677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 4677648 |
End bp | 4679837 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | multifunctional fatty acid oxidation complex subunit alpha |
Protein accession | YP_003261565 |
Protein GI | 261823459 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.535693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTATC AAGGTGAATC CCTCTACCTT AACTGGCTTG AGGACGGCAT TGCCGAGCTG GTATTTTCTG CCCAGGGCTC CGTAAACACA CTAGATACAC GCACGGTTGC CAGCCTAGGT AAAGCGCTCG ACGTTCTGGC GGAACAGCCG AACCTGAAGG GCTTACTGCT GCGTTCGGAT AAACCTGCAT TTATTGTCGG GGCCGATATC ACGGAATTCC TTTCTCTTTT TGCCGCACCA GCCGAAAAAC TGCATGAGTG GCTGGCCTTC GCCAACCGTA TTTTCAACCG CCTTGAGGAT TTATCCGTTC CCACACTGTC CGCGATTAAT AGCTATGCGT TGGGTGGCGG CTGTGAATGC GTGCTGGCGA CCGATTTTCG CTTAGCCACA CCGGATGCAC GTATCGGCTT GCCCGAAACT AAACTCGGGA TCATGCCGGG TTTTGGTGGC ACGGTCAGGC TACCACGTCT GCTGGGTGCT GATAGCGCGC TGGAGATTAT CGCCGCAGGT AAAGACGTCA GCGCGGTCGA TGCTTTAAAA GTGGGGCTGG TGCAGGCCGT TGTCGCGAAT GAAAAACTGA TTCCCGCCGC TATCAAAATG CTAAAACAGG CTATAAATGG CGAATTAGAC TGGCAGGCTT ATCGGCGCCC AAAACTTGAG GCGCTGAAGC TCAGTAAAAT TGAAGCTATG ATGAGCTTTA CCACCGCCAA AGCGATGGTG CTGCAAACCG CCGGGAAACA TTATCCGGCA CCGATGTTAG CGGTAAAAAC CATCGAAGCC GCCGCAACCA TGACGCGAGA TGACGCCTTG CAGCTCGAAA CGCAGCACTT CGTTCAACTG GCTCGCTCAA ATGAAGCCCG CGCCCTCGTC GGTATTTTCC TCAACGATCA ATATGTTAAA GGCAAAGCGA AGAAGCTGAT CGGCGAGACA TCTGTGCCAC AGCAGGCCGC CGTACTAGGT GCAGGAATTA TGGGCGGCGG AATTGCCTAT CAGTCCGCGT TCAAAGGCGT GCCGATTCGG ATGAAAGACA TCAGCGAGAA ACCGCTCGCA CTGGGGATGA ATGAAGCAGC CAAACTCCTG AATAAGCAGA TGGAACGAGG CAAGCTGGAC GGAATGAAAA TGGCGGCGAT TCTGGCCAGT ATTCAGCCAA CGCTGGATTA CGCCGGGTTC GAGCGTACCG ATATCGTGGT TGAAGCCGTG GTAGAAAACC CGAAAATCAA AGCCAGCGTA TTAGCAGAAA CCGAATCGCA CATTAGCGAA AGTACGATTC TGGCTTCGAA TACCTCAACG ATTCCCATTA CTACACTGGC TGCTTCGTTA GAACGACCAC AAAATTTCTG CGGTATGCAC TTCTTCAACC CAGTACACCG CATGCCGCTG GTTGAAATCA TTCGCGGCCC CAAAACCAGT GACAGCACCA TCGCCAGCGT GGTGGCTTAC GCCAGCAAAA TGGGCAAGAC ACCGATTGTC GTGAACGACT GCCCCGGATT CTTCGTGAAT CGCGTCCTAT TTCCCTACTT TGCGGCATTC AGCTTATTGC TCAGAGACGG TGCCGATTTC CGCGATATCG ATAATGTCAT GGAGAAAAAA TTCGGTTGGC CGATGGGCCC TGCTTATCTG CTTGACGTTG TCGGTATTGA TACCGCTCAC CATGCTCAGA CCGTGATGGC TGAGGGCTTC CCACAGCGCA TGGCGAAAGA CTATCGCGAT GCGATTGATG TGCTGTTTGA ACACCAACGT TTCGGGCAGA AGAATGGTCA AGGCTTCTAC CGTTATCAAA CGGATGGCAA GGGGAAACAG CGTAAAGAGC GAGATGACGC CGTAGATACG CTCCTTAAAG ACATCAGCCA ACCGAAAAAA ACTTTCAGTG CAGAAGAGAT TATCGCTCGC ATGATGATCC CGATGATTAA TGAAGTCGCG CGTTGCCTGG AAGAAGACAT CGTTGCCAGT CCGGCCGAAG CAGACATGGC GCTGGTATAC GGGCTAGGTT TTCCTCCCTT CCACGGCGGA GCCTGCCGTT ATCTGGATAC CTTGGGCAGC GAACGTTATG TCGAAATGGC GCAGTCGTTG GCACACCTCG GCACCATCTA TCAGGTGCCA GACGGCTTAC AGCAAAAAGC CAGAAGCAAT GAAGGCTATT ACCCATCGGT CGCGCCACAC GCGGACATTT CCCACGGACA ACCGGCATGA
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Protein sequence | MLYQGESLYL NWLEDGIAEL VFSAQGSVNT LDTRTVASLG KALDVLAEQP NLKGLLLRSD KPAFIVGADI TEFLSLFAAP AEKLHEWLAF ANRIFNRLED LSVPTLSAIN SYALGGGCEC VLATDFRLAT PDARIGLPET KLGIMPGFGG TVRLPRLLGA DSALEIIAAG KDVSAVDALK VGLVQAVVAN EKLIPAAIKM LKQAINGELD WQAYRRPKLE ALKLSKIEAM MSFTTAKAMV LQTAGKHYPA PMLAVKTIEA AATMTRDDAL QLETQHFVQL ARSNEARALV GIFLNDQYVK GKAKKLIGET SVPQQAAVLG AGIMGGGIAY QSAFKGVPIR MKDISEKPLA LGMNEAAKLL NKQMERGKLD GMKMAAILAS IQPTLDYAGF ERTDIVVEAV VENPKIKASV LAETESHISE STILASNTST IPITTLAASL ERPQNFCGMH FFNPVHRMPL VEIIRGPKTS DSTIASVVAY ASKMGKTPIV VNDCPGFFVN RVLFPYFAAF SLLLRDGADF RDIDNVMEKK FGWPMGPAYL LDVVGIDTAH HAQTVMAEGF PQRMAKDYRD AIDVLFEHQR FGQKNGQGFY RYQTDGKGKQ RKERDDAVDT LLKDISQPKK TFSAEEIIAR MMIPMINEVA RCLEEDIVAS PAEADMALVY GLGFPPFHGG ACRYLDTLGS ERYVEMAQSL AHLGTIYQVP DGLQQKARSN EGYYPSVAPH ADISHGQPA
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