Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4210 |
Symbol | |
ID | 8532647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 4644869 |
End bp | 4646353 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | sodium/proline symporter |
Protein accession | YP_003261541 |
Protein GI | 261823435 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATAA GCACACCCAT GCTGGTGACG TTTCTGGTGT ATATTTTCGG GATGGTCCTC ATCGGCCTGT TTGCCTACCG CGCCACCAAT AACTTTGGTG ATTACATTCT GGGCGGACGT CGGATGGGAA GCGTCGTCAC TGCACTGTCG GCTGGCGCTT CCGATATGAG CGGCTGGCTG CTGATGGGAT TACCGGGTGC TATTTTCATT TCCGGTATTT CTGAAAGCTG GATCGCGATC GGCCTGACAT TAGGCGCCTA CCTGAACTGG AAATGGGTCG CTGGACGCCT GCGCGTACAC ACCGAAATAA ACCACAACGC GCTCACGCTA CCTGACTATT TCACCCACCG CTTTGAAGAT AACAGCAAAT TACTGCGTGT GATTTCTGCG TTAGTGATCC TGATTTTCTT CACCATCTAT TGCGCATCCG GCGTGGTAGC AGGGGCTCGT CTGTTTGAAA GCACCTTCGG CATGAGCTAC GACACCGCGT TATGGGCAGG AGCAGCGGCC ACTATCGCCT ATACCTTTAT CGGCGGCTTT CTGGCTGTAA GCTGGACGGA CACCGTGCAG GCCAGTCTAA TGATTTTCGC CCTGATCCTG ACGCCAGTGA TGGTCATTTT ATCACTGGGA GGAATAGACA CCTCACTCAT GGTGATTGAA GCGAAAAACC CAGCCAATAT GGATATGTTC AAAGGACTGA ATTTTGTCGC TATTATCTCG CTGATGGGCT GGGGTCTGGG CTATTTCGGT CAGCCGCACA TTCTGGCACG TTTTATGGCT GCCGATTCAC ACCACACCAT TCACAGCGCG CGCCGCATCA GTATGACCTG GATGATTCTG TGCCTGACCG GTGCTGTAGC GGTAGGTTTC TTCGGCATCG CCTACTTCAA CAATCACCCG GATCAGGCAG GTAATGTGGC GCAAAATAGC GAGCGCGTCT TTATCGAGCT ATCCATGCTG CTGTTCAATC CGTGGATTGC CGGCGTGCTG CTGTCTGCGA TTCTGGCTGC CGTGATGAGT ACGCTGAGCT GCCAGTTACT GGTGTGCTCC AGCGCCATCA CCGAGGATTT GTACAAGCCC TTTCTGCGCA AAAATGCCAG TCAGAAAGAG CTGGTATGGG TGGGACGTGC GATGGTGCTA TTAGTCGCTA TCATTGCTAT CGCGCTGTCG CTCAACCCTG AAAACCGCGT ACTCGGTCTG GTGAGCTATG CCTGGGCAGG GTTCGGTGCC GCCTTCGGAC CGGTGATTTT GATTTCTCTG CTGTGGTCAC GTATGACACG CAACGGCGCA CTGCTCGGCA TGATCGTAGG TGCAGCAACG GTACTGATCT GGAAGCAGTA TGCCTGGCTG GGTCTGTATG AAATCATCCC CGGATTTATC TTCAACAGTC TGACCATTTT CATCGTCAGC CTGTTGGGTA AAGCGCCGTC AAAAGCGGTT ACCGACCGCT TCAAGCAGGC AGAAGCGGAA TACCAGTCCG TTTAG
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Protein sequence | MTISTPMLVT FLVYIFGMVL IGLFAYRATN NFGDYILGGR RMGSVVTALS AGASDMSGWL LMGLPGAIFI SGISESWIAI GLTLGAYLNW KWVAGRLRVH TEINHNALTL PDYFTHRFED NSKLLRVISA LVILIFFTIY CASGVVAGAR LFESTFGMSY DTALWAGAAA TIAYTFIGGF LAVSWTDTVQ ASLMIFALIL TPVMVILSLG GIDTSLMVIE AKNPANMDMF KGLNFVAIIS LMGWGLGYFG QPHILARFMA ADSHHTIHSA RRISMTWMIL CLTGAVAVGF FGIAYFNNHP DQAGNVAQNS ERVFIELSML LFNPWIAGVL LSAILAAVMS TLSCQLLVCS SAITEDLYKP FLRKNASQKE LVWVGRAMVL LVAIIAIALS LNPENRVLGL VSYAWAGFGA AFGPVILISL LWSRMTRNGA LLGMIVGAAT VLIWKQYAWL GLYEIIPGFI FNSLTIFIVS LLGKAPSKAV TDRFKQAEAE YQSV
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