| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4099 |
|---|
| Symbol | |
|---|
| ID | 8532532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 4513276 |
|---|
| End bp | 4513788 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF336 |
|---|
| Protein accession | YP_003261434 |
|---|
| Protein GI | 261823328 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACCATG AACTGAATAC TGAACTGGAT TGCCGTATCA ATGAGGCGAT TTCGCGGCAG
TTATTGCCAC GCCGCCTCTC CTTAAGTCTG GCGAATGCCG CGCTGTTGGC AAAATATGCC
AGCGAAGCGG CGGAAGATGC CAATGTCCCC ATCGTTTTCA GTCTGGTGGA TGCCAGCGGC
CAGCAGCGCT ACTTCTTTAG CATGGATAAC GCATTACTCA TTAGCCATAC GCTCGCGGGA
CAAAAGGCCT GGAGTGCCGT GGCGTTGAAA ATGCCGACCC ACACACTCGC GGAAAAAGTA
CAGCCCGGAT CCAGCCTTTA CGGTTTGCAA AATGAACCTG GCATTTGTTG CTTTGGCGGT
GGCTTGCCCT GCTGGTCAGG CGGGGTGCTG TTAGGGGCTA TCGGTATTAG CGGCGGTAGC
GTCGAAGAGG ATATTGCGAT CGCCAGCGCC GCCCTCGCAC GTTTCAGTCG TGAGCAATTC
CCACTCACAC CATTTAATGA ATCGTTTTTC TAA
|
|---|
| Protein sequence | MHHELNTELD CRINEAISRQ LLPRRLSLSL ANAALLAKYA SEAAEDANVP IVFSLVDASG
QQRYFFSMDN ALLISHTLAG QKAWSAVALK MPTHTLAEKV QPGSSLYGLQ NEPGICCFGG
GLPCWSGGVL LGAIGISGGS VEEDIAIASA ALARFSREQF PLTPFNESFF
|
|---|
| |