Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4042 |
Symbol | |
ID | 8532475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4448657 |
End bp | 4449580 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003261378 |
Protein GI | 261823272 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTT CCACTGAGCC GCCGGTCAGC CGTGAGTCGG TAATGCGGAC ACCACCGGAA AAACGTGTGA GTCGCCTGCG GCTACGCGGG GCGCGGATCG GCGGGTTTCT CTTGACGATG CTACGCAATC CGCTCACCGC GATTGGTTCC GCGATTGTGC TGATGTTGGT GCTGGTTGCC ATCTTCGCGC CGTGGATCGC CACGCACGAT CCGCTGGTAC AGGATTTGTC CAATGCGCTA CAGGCACCGA GTGCGGCACA TTACTTTGGC ACCGATGAGT TTGGGCGCGA TGTGTTTAGT CGTCTGGTCT ACGGTTCGCG CATCACGCTG TATATCGTTG CGCTGGTGTC GGTCACCGTT GGGCCGATCG GGTTGGCGCT AGGTGTGGTT TCGGGGTATT ACGGCGGTAT CGTCGATACC ATCCTGATGC GTATCACCGA TATTTTCATC TCTTTCCCTA GTCTGGTATT GGCGCTGGCG TTCGTGGCGG CACTCGGTCC TGGTCTGGAT CATGTGGTGA TCGCGATTAC GCTGACGGCC TGGCCGCCGA TTGCGCGTTT GGCAAGGGCG GAGACGCTGT CGCTGCGCCA CGCGGATTTT GTTTCTGCCG TGAAGCTGCA AGGCGCATCG TCTGTCCGCA TCCTGCTGCA CCACATTGTT CCGCTGTGTC TGCCGTCGGT GATTATTCGT ATCACCATGA ATATGGCGGG CATCATTCTA ACGGCTGCGG GGCTGGGCTT TCTGGGGTTG GGGGCACAGC CGCCCGATCC TGAATGGGGT GCGATGATCT CTGCGGGTCG TCGTTACATG ATGGAGTGCT GGTGGTTAGT AACTATTCCG GGGCTGGCGA TTTTGATTAA CAGCCTGGCG TTCAACTTCC TTGGAGATGG CCTACGTGAC ATCCTCGATC CCAGAACTGA ATAA
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Protein sequence | MNISTEPPVS RESVMRTPPE KRVSRLRLRG ARIGGFLLTM LRNPLTAIGS AIVLMLVLVA IFAPWIATHD PLVQDLSNAL QAPSAAHYFG TDEFGRDVFS RLVYGSRITL YIVALVSVTV GPIGLALGVV SGYYGGIVDT ILMRITDIFI SFPSLVLALA FVAALGPGLD HVVIAITLTA WPPIARLARA ETLSLRHADF VSAVKLQGAS SVRILLHHIV PLCLPSVIIR ITMNMAGIIL TAAGLGFLGL GAQPPDPEWG AMISAGRRYM MECWWLVTIP GLAILINSLA FNFLGDGLRD ILDPRTE
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