Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4035 |
Symbol | |
ID | 8532468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 4439931 |
End bp | 4441055 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | Pectate lyase/Amb allergen |
Protein accession | YP_003261371 |
Protein GI | 261823265 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.634971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATACC TACTGCCTTC TGCAGCCGCT GGGCTGTTGC TGCTCGCAGC CCAACCGACA ATGGCGGCAA ACACGGGAGG TTATGCCACC ACTGACGGCG GCGATGTTTC CGGCGCGGTG AAGAAAACCG CACGTTCTCT GCAAGAAATC ATTAATCTCA TCGAAGAAGC GCAACTGGAT TCTAAAGGTA AGAAAGTCAA AGGCGGCGCT TATCCGCTCG TCATCACCTA TAACGGTAAT GAAGATGCAT TGATCAAAGC GGCTGAAGCC AATATCTGTG GCCAATGGAG CAAAGATCCG CGCGGTGTAG AAATCAAAGA GTTTACCAAA GGGCTCACCA TCCTTGGTAC CAATGGCTCT TCCGCCAATT TCGGTATCTG GCTGGTTAAC TCTTCCAACG TTGTCGTGCG CAACATGCGC TTCGGCTACA TGCCGGGTGG AGCAAAAGAT GGCGATGCCG TCCGTATCGA CAACTCACCG AACGTCTGGA TCGACCACAA CGAGATCTTC GCTAAGAATT TCGAATGTGC TGGTACGCCA GACAACGACA CCACTTTTGA ATCGGCTGTC GATATCAAGA AAGGGTCAAC CAACGTCACC GTATCGTACA ACTATATCCA CGGCGTGAAA AAGGTAGGTT TGAGCGGTTC AAGCAACACG GACACCGGCC GTAACCTGAC TTACCATCAC AATATTTACA GCGATGTTAA CTCACGTCTG CCGCTGCAAC GTGGTGGTCA GGTACATGCT TATAACAACC TGTATGACGG CATCAAAAGC TCAGGCTTTA ACGTCCGTCA GAAGGGGATT GCGCTGATCG AAAGCAACTG GTTCGAAAAT GCACTCAACC CAGTAACTGC ACGTAATGAC GATTCCAACT TCGGTACCTG GGAACTCCGT AACAACAACA TTACCAGCCC ATCTGATTTT GCTAAATACA AGATCACTTG GGGTAAACCG TCTACCCCGC ACATCAATGC GGATGACTGG AAAAGCACCG GTAAATTCCC AGCCGTTCCG TATAGCTACT CACCAGTTTC TGCACAGTGC GTGAAGGATA AACTGGCAAA CTATGCTGGC GTAGGTAAAA ACCAGGCAGT ACTGACAGCA GCCAACTGTA AATAA
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Protein sequence | MKYLLPSAAA GLLLLAAQPT MAANTGGYAT TDGGDVSGAV KKTARSLQEI INLIEEAQLD SKGKKVKGGA YPLVITYNGN EDALIKAAEA NICGQWSKDP RGVEIKEFTK GLTILGTNGS SANFGIWLVN SSNVVVRNMR FGYMPGGAKD GDAVRIDNSP NVWIDHNEIF AKNFECAGTP DNDTTFESAV DIKKGSTNVT VSYNYIHGVK KVGLSGSSNT DTGRNLTYHH NIYSDVNSRL PLQRGGQVHA YNNLYDGIKS SGFNVRQKGI ALIESNWFEN ALNPVTARND DSNFGTWELR NNNITSPSDF AKYKITWGKP STPHINADDW KSTGKFPAVP YSYSPVSAQC VKDKLANYAG VGKNQAVLTA ANCK
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