Gene Pecwa_4028 details

Gene Information

• Locus tag: Pecwa_4028
• ID: 8532461
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 4432562
• End bp: 4433164
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 53%
• Product: Lysine exporter protein (LYSE/YGGA)
• Protein accession: YP_003261364
• Protein GI: 261823258

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACTGA GTTTATTTCT TTCGATGTTG GGCTTTTTGT GGGTAGCGGC CATCACACCG 
GGGCCGAATA ATATGCTGTT GACCACCTCG GGCGCGAATT TTGGCTTTAT GCGTTCACTG 
TGGTTGATGG TCGGCATCAT GCTGGGCATG CAGAGCATTT TGCTGCTGGT CGCATTCGGC 
GTCGGTGGTT TGATTCTGAT TTATCCTTCG CTGCACTTTG TCCTGAAAGT CCTCGGTAGC 
GCCTATCTGC TTTGGCTGGC GTGGAAAATC GCCACGGCGG CTTACGAACG GCTGGAGACG 
TCCGTTGCAC CGCCTCAGCC GATCCGACTT TATCAGGGGT GGTTACTGCA ATTTCTGAAC 
CCAAAAGCGT GGCTCATGGC GCTGGGTGCG GTTGCCAGCT TTAGTCTGGC GGGTGAAGGT 
TATAACCATT CTGTGATCGC GATAAGCATC GGCATTGTGC TGGTGAATTT GGTTTCCGGC 
GTCATCTGGC TTGGGTTTGG TACGATGATT GGGCGACTGC TGCGCAGTAA GAAAGCGTGG 
ATTATCTTCA ACGTGTCAAT GGGGCTGCTG ACTGCCGCCT GTGTGCTGTT GATTTGGCAT 
TAG 

 

Protein sequence

MELSLFLSML GFLWVAAITP GPNNMLLTTS GANFGFMRSL WLMVGIMLGM QSILLLVAFG 
VGGLILIYPS LHFVLKVLGS AYLLWLAWKI ATAAYERLET SVAPPQPIRL YQGWLLQFLN 
PKAWLMALGA VASFSLAGEG YNHSVIAISI GIVLVNLVSG VIWLGFGTMI GRLLRSKKAW 
IIFNVSMGLL TAACVLLIWH