Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4001 |
Symbol | rplC |
ID | 8532434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4409526 |
End bp | 4410155 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | 50S ribosomal protein L3 |
Protein accession | YP_003261338 |
Protein GI | 261823232 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000133554 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGGTT TAGTCGGTAA AAAAGTGGGC ATGACCCGTA TCTTCACTGA AGATGGCGTA TCTATCCCCG TAACCGTTAT CGAAATTGAA GCAAACCGCG TAACTCAGGT TAAAGACCTG GCTAACGACG GTTACCGCGC TGTGCAAGTA ACTACTGGTG CTAAAAAAGC AAACCGTGTT ACCAAGCCAG AAGCAGGTCA CTTTGCTAAA GCTGGTGTAG AAGCTGGCCG TACCCTGCGT GAATTCCGTC TGTCTGAAGG CGAAGAATTC ACTATTGGTC AGAGCATCAG TGTTGAAATT TTCGCTGACG TTAAAAAAGT AGACGTTACT GGTACATCTA AAGGTAAAGG TTTTGCTGGC ACAGTTAAGC GCTGGAATTT CCGTACTCAG GATGCTACCC ACGGTAACTC CTTGTCCCAC CGCGTTCCGG GTTCTATCGG TCAGAACCAG ACTCCGGGCA AAGTGTTCAA AGGCAAGAAA ATGGCAGGCC AGCTGGGTAA CGAACGTGTA ACCGTTCAGA GCCTGGACGT AGTGCGTGTT GACGCTGAGC GCAACCTGCT GCTGGTTAAA GGTGCTGTTC CGGGAGCTAC CGGTAGCGAC CTGATCGTTA AACCAGCTGT GAAGGCGTGA
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Protein sequence | MIGLVGKKVG MTRIFTEDGV SIPVTVIEIE ANRVTQVKDL ANDGYRAVQV TTGAKKANRV TKPEAGHFAK AGVEAGRTLR EFRLSEGEEF TIGQSISVEI FADVKKVDVT GTSKGKGFAG TVKRWNFRTQ DATHGNSLSH RVPGSIGQNQ TPGKVFKGKK MAGQLGNERV TVQSLDVVRV DAERNLLLVK GAVPGATGSD LIVKPAVKA
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