Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3972 |
Symbol | mscL |
ID | 8532405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 4395973 |
End bp | 4396386 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | large-conductance mechanosensitive channel |
Protein accession | YP_003261310 |
Protein GI | 261823204 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0532201 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTATCA TCAAAGAATT CAGAGAGTTT GCCATGCGTG GCAACGTTGT CGATTTAGCG GTGGGTGTCA TTATTGGTGC CGCTTTCGGT AAAATTGTTT CTTCTCTGGT ATCGGATATT ATTATGCCGC CGCTAGGGCT TTTGATTGGT GGTGTCGATT TTAAACAGTT CAGCCTCATT CTCCGTGATG CCCAAGGCGA CATTCCTGCC GTTGTCATGA ACTACGGCGC TTTCATCCAG AATATTTTCG ACTTTGTCAT CGTCGCTTTT GCAATTTTTA TAGCTATCAA GCTGATGAAT AAAATGCGTC GTAAACAGGA AGATATCCCT ACCGCCCCAC CAAAACCGAG CGCAGAAGAG AAGCTGCTAG CTGAAATCCG CGATTTGCTT AAAGGGCAGC AGCCCAAACA GTAA
|
Protein sequence | MSIIKEFREF AMRGNVVDLA VGVIIGAAFG KIVSSLVSDI IMPPLGLLIG GVDFKQFSLI LRDAQGDIPA VVMNYGAFIQ NIFDFVIVAF AIFIAIKLMN KMRRKQEDIP TAPPKPSAEE KLLAEIRDLL KGQQPKQ
|
| |