Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3958 |
Symbol | |
ID | 8532386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4377997 |
End bp | 4379595 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | malate synthase |
Protein accession | YP_003261296 |
Protein GI | 261823190 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCAGC AGACGATAAA CAGAGAATTG GCATTTAGTC AGCGTTTTGG CGAAGGTGAG AAGCACATTC TTACTGAAGA GGCAGTTGAT TTCTTAGCGG AGTTGGTCGC ACATTTTACG CCAGCACGTA ATCAATTACT TGCGGAACGG CAGGTGCAGC AGCGTAATAT CGATCAGGGT AAGCTACCAA ATTTTATTTC AGAAACAGTT TCCATTCGAG ATAAAGCATG GATGATACGT GGTATTCCCG ATGACCTTCA GGATCGCCGT GTTGAAATTA CTGGCCCGGT TGAACGCAAG ATGGTGATCA ACGCGTTGAA TGCCAATGTG AAGGTTTTTA TGGCGGACTT TGAGGATTCG CTGTCACCGG GATGGGAAAA GGTGATTGAT GGGCAAATCA ACTTGCGTGA TGCCGTGCGC GGTACGATTT CCTACATCAA TGAAACAGGA AAAATTTACC AGTTGAAACC CAATCCTGCT GTATTAATTT GCCGGGTACG CGGGTTGCAT TTGCCTGAAA AACACGTGTC CTGGCAGGGG GAAGCCATTC CCGGCAGCCT GTTTGATTTC GCGCTGTATT TTTTCCACAA CTATCAGGAA TTGTTGAAGA AAGGTAGTGG TCCTTATTTC TATTTGCCAA AGACACAGTC ATGGCAGGAA GCGGCCTGGT GGAATGATGT CTTCTGCTAT ACGGAAGATC GCTTTGACCT TCCGCGTGGG ACGATCAAAG CGACAGTATT GATTGAAACA CTACCTGCCG TTTTCCAGAT GGACGAAATC CTCTACCACT TACGCGATCA TATCGTCGGG TTGAACTGTG GTCGTTGGGA TTATATTTTC AGTTATATCA AAACATTAAA GAGCCACAGC GATCGCGTTC TGCCCGATCG TCAGTCGGTG ACGATGGAAA AACCCTTTCT TAGTGCTTAC TCGCGGTTGT TAATCAAAAC CTGTCATCGG CGCGGTGCAT TCGCCATGGG TGGAATGGCA GCGTTCATTC CGAGTAAGGA TGCGGAACGC AATAACTGGG TGTTGGATAA GGTACGTAAA GACAAAGAAC TGGAAGCTCA CAATGGTCAC GATGGCACTT GGGTGGCTCA TCCGGGGCTG GCAGATGCCG TGATGGAGGT ATTCGATCGG GCGTTAGGTG AGCGTAAAAA TCAGCTCGAT ATCAGCCGTG AACAGGATGC GCCTATTCGC GCAGAGGAAC TGCTGGAACC CTGTCCGGGG GAGCGTACGG ACATCGGTAT GCGCGCGAAT ATCCGCGTTG CCGTGCAGTA CATCGAAGCG TGGATATCTG GTAATGGTTG CGTCCCGATT TATGGATTGA TGGAGGACGC GGCGACGGCA GAAATTTCCC GAACCTCGAT CTGGCAGTGG ATTCGTCATG GTAAGACGTT GAGCGATGGT CGAGTGATCA CCAAAACGCT GTTCCGCCAG ATGCTGGCCG AAGAGATGTT TGTGATTCAG GAAGAATTAG GTGATGCCCG TTTTAGCGGA GGGCGCTTCG ATGAGGCAGC CCGACTGATG GAGCAAATCA CTACGCAAGA TGAACTGATC GACTTTCTGA CGTTACCCGG CTACGCATTG CTTGATTAA
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Protein sequence | MMQQTINREL AFSQRFGEGE KHILTEEAVD FLAELVAHFT PARNQLLAER QVQQRNIDQG KLPNFISETV SIRDKAWMIR GIPDDLQDRR VEITGPVERK MVINALNANV KVFMADFEDS LSPGWEKVID GQINLRDAVR GTISYINETG KIYQLKPNPA VLICRVRGLH LPEKHVSWQG EAIPGSLFDF ALYFFHNYQE LLKKGSGPYF YLPKTQSWQE AAWWNDVFCY TEDRFDLPRG TIKATVLIET LPAVFQMDEI LYHLRDHIVG LNCGRWDYIF SYIKTLKSHS DRVLPDRQSV TMEKPFLSAY SRLLIKTCHR RGAFAMGGMA AFIPSKDAER NNWVLDKVRK DKELEAHNGH DGTWVAHPGL ADAVMEVFDR ALGERKNQLD ISREQDAPIR AEELLEPCPG ERTDIGMRAN IRVAVQYIEA WISGNGCVPI YGLMEDAATA EISRTSIWQW IRHGKTLSDG RVITKTLFRQ MLAEEMFVIQ EELGDARFSG GRFDEAARLM EQITTQDELI DFLTLPGYAL LD
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