| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3929 |
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| Symbol | |
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| ID | 8532355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 4339594 |
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| End bp | 4342629 |
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| Gene Length | 3036 bp |
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| Protein Length | 1011 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | YP_003261267 |
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| Protein GI | 261823161 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTCC CCACTAAAGC GCTTTTGGCT ACGGCAATAG CCTCATTGAT ACCGTTTGGT
GCCTCTGCCG CAGAGGCAGA ACCGGCCTCT GCAATTGATG TTCTCTCAGG GTTTAACAAA
TTCTGGACTG CGGGTACAGC CTGGAATAAC GGCATACCCA CTACGCTTGG CGCGATCGTA
CTGCGACAGA ATATCCAAAC GGTGATTGAT ATCGCCCGTT CGCGCACCCA GGCACAAGAA
ATATCAGCTT TTGAATTCGA TGCTCAAGAT GCCAATTACG CGGTCATCGC TGGCCTTGGC
CCGCTAGCCA GCATCTTGAA AACGGAAACA GGTGCTTTCA CAACGGTCGA CGGTATTCCA
GACCGCGCAT ACAGCAGTCG AGTGAGTGAT GGCGGCAACG GACTTGGATC AGCCACCAGC
GGGCTGGGCA AGGTCGTCGA ACTCGTCAGC GCCGTGCGCT ACCCAGCCTC CACCACGCCA
GCCAAAAATA ACTACAACTA TCCACGTCCC TTCCGCCAAA CGCTGGACGG TGAAGATCTA
AGCTGGGTTC TGCAAAAATC ACTCGTTGCC CGCGTGCCAG CAACGGGAAA CGGTGATGGC
GGTTTCCCTA GCGGACACAC TAATGCAGGC TATCTCGCCG CTTTCGGTCT TGCCTACGCC
GTTCCGCAAC AATATTCCGA TCTGATCCTT CGTGCTGGCG AGATTGGCTA CAGCCGCGTC
GTGACAGGCA TTCACTCTCC ACTGGATGTG ATCGGCGGCC GAATGCACGC CACCTATTAC
GCTATTCAGT ACCTCATCGC CAACCCAACG CTACGTGCAG AAGCCTACGA TCAGGCGCAG
AACTTCTTCG CCGGACAATG TGGGGGCACT ATCACCGCAT GCTATACCAG CGGCAAGAAT
GCTGAAGCCG CCTATGCTCA ATATCAAATC GATAAAGCTC TGTATGCCAA ATACACCTTC
GAGAACGCCT TCACGCCTAT CGGCGACACC AGCGCCGCCG CCGCCGTTGT TCCCCAAAAT
GCTGAAATGC TGATCGAAAC ACGCTATCCC TACCTTACCG CATCCCAACA GCGCGACATT
CTGGCAACCA CGTCGAATGC ATCAGGCGGC GTGATGGATA ACGGGATGGG TTACGATCGA
TTGAACCTAT TCAAGGCGGC AAACGGTTAC GGCGCGTTCA ACAGCTCTGT TTCTGTGACA
ATGAACGCAG CAGACGGCGG TTTATCTGCC GCCGACCTTT GGCTAAACGA CATCACAGGT
GCGGGCACTT TTACCAAGTC AGGTAGCGGG CAGCTCACGC TCGCAGGACG TAATAGCTGG
AGTGGCGGCA CGACCGTGTC AGGTGGAACG CTGGTTGGCA CCAATGGTCG GGCTTTCGGC
ACTGGCGCTA TCGTCAACAA CGCAACGTTG GCTTTTGACA TCAATACCGA CGATACGCTC
GCGAATGACA TTTCAGGTAA CGGGACACTG CGCAAAGACG GTGCAGCTAA GCTGACCTAT
ACGGGTAATG GATCTTCCTT TACCGGCACA ACGCAGGTGA CAAACGGCAG ATTGGCAATT
AACGGCTCAC TGGGCGGTTC AATCGTTGTG GCCGATGGCG CGACCGTTTC GGGCAGCGGC
ACGATAGGCA GTCTGACCGT CGCCAGTGGC AGTACGCTGG CTCCCGGTAA CTCGATTGGC
ACACTAAAAG TGGACGGCGA TCTAACGTTA ACCAATGGGG CTATTTATGA AGTTGAAGTC
AATCCAGAGA CGACCGAAAG CGATCTGATC GCGGTAACAG GCACGGCCAC GCTGGGCGAT
GCTTCAGTGC TGCACGTCGG CCAGAATGGG GATTATCGTA TTGCTTCAAC CTATACCATT
CTGACCGCAG ACAAGGGTAT CTCCGGCACC TTCGGTGCGG TGACGAGTCG CTATGCTTTC
CTCGATGCCA ATCTGGGTTA CAGCGCTAAT GCGGTGACGA TGCAGCTCGC ACGTAACGAC
ATCACATTTG CGTCGGTCGC TACCACAGCC AATCAATCAG CCACCGCCAA TGCGGTAGAG
TCCCTAGGTA CTGGCAATGC CGTTTATAAC GCAGTAGCGA TGCTCGACCG AGGCGCACCA
CAGAACGCCT TTGACGCGTT ATCGGGTGAA GGCTATGCCT CTCTGGCTGG TGCCATGACA
CGCGGTGCAT TGACGGTCAG CGATACGGTT ACAGAACATG CCCGTACCAC GCATGATGAT
AACGTCTGGC TCAATGTTTA TGGGAGTCGC AATGAGGCGA ATGGCGCTAA CGGCACTGCC
GATACTGACT ATCGCAGCAA TGGTTTTCTG CTCGGCATTG ATGGTGCGCT GTCCGATAAC
ATGATGCTCG GTATTTTCGC CGGAGCTGAC AAGGGAGATT TTGACGTAAA TGGGCGCCGT
TTCTCCGCAG ATGTCGACAA CTACCAGTTA GGTGCTTATG CCAATTACAC GTATAACCGG
TTGGGATTGA CCTTCGGTAC AGTGGGAAGC TGGGGCGATA TCGCAGCGAA GCGCGACGTC
ACCGTCGGTT CCCTGAACGA GAAATTGTCA GCGGATCTGG ATGCCCGCAC TCTCCAAGTA
TTTGGTGAGG CGCGTATGAA ATTCGATGCA AACGTAGTTA CTGTAGAACC TTTCGCCAGA
TTAGCGCACG TCGCCAGTAA AATGGACAGT TTCAACGAAG CTGGCGGTGC TGCCGCATTA
GGCGGAGAAG CGCTCAAAAT GGATACCACC TTTTCTACCC TCGGCGTACG TCTGGAACAC
AGCTTCGGCA CGCAAGAACG CGCATGGACA GTGAATAGCA GCATCGGCTG GCGACATGCT
TTTGGCGACA TCGACCCCAC AGCACGCCTG CACTTCATTG GAGCTGATAA CTATAACGTG
ACGGGAACGC CACTGGCTGA AAATAGCGTA CGCGTTGAAG CGGGTATCGG CAAAAAACTA
ACCGATAATG CGAACCTGTC ATTATCCTAT GGTGGCCAAT TCGGTAGCGG CGTTACCGAC
AATGCTGCTC ACCTGAAACT GAATGTCCGT TTCTAA
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| Protein sequence | MAFPTKALLA TAIASLIPFG ASAAEAEPAS AIDVLSGFNK FWTAGTAWNN GIPTTLGAIV
LRQNIQTVID IARSRTQAQE ISAFEFDAQD ANYAVIAGLG PLASILKTET GAFTTVDGIP
DRAYSSRVSD GGNGLGSATS GLGKVVELVS AVRYPASTTP AKNNYNYPRP FRQTLDGEDL
SWVLQKSLVA RVPATGNGDG GFPSGHTNAG YLAAFGLAYA VPQQYSDLIL RAGEIGYSRV
VTGIHSPLDV IGGRMHATYY AIQYLIANPT LRAEAYDQAQ NFFAGQCGGT ITACYTSGKN
AEAAYAQYQI DKALYAKYTF ENAFTPIGDT SAAAAVVPQN AEMLIETRYP YLTASQQRDI
LATTSNASGG VMDNGMGYDR LNLFKAANGY GAFNSSVSVT MNAADGGLSA ADLWLNDITG
AGTFTKSGSG QLTLAGRNSW SGGTTVSGGT LVGTNGRAFG TGAIVNNATL AFDINTDDTL
ANDISGNGTL RKDGAAKLTY TGNGSSFTGT TQVTNGRLAI NGSLGGSIVV ADGATVSGSG
TIGSLTVASG STLAPGNSIG TLKVDGDLTL TNGAIYEVEV NPETTESDLI AVTGTATLGD
ASVLHVGQNG DYRIASTYTI LTADKGISGT FGAVTSRYAF LDANLGYSAN AVTMQLARND
ITFASVATTA NQSATANAVE SLGTGNAVYN AVAMLDRGAP QNAFDALSGE GYASLAGAMT
RGALTVSDTV TEHARTTHDD NVWLNVYGSR NEANGANGTA DTDYRSNGFL LGIDGALSDN
MMLGIFAGAD KGDFDVNGRR FSADVDNYQL GAYANYTYNR LGLTFGTVGS WGDIAAKRDV
TVGSLNEKLS ADLDARTLQV FGEARMKFDA NVVTVEPFAR LAHVASKMDS FNEAGGAAAL
GGEALKMDTT FSTLGVRLEH SFGTQERAWT VNSSIGWRHA FGDIDPTARL HFIGADNYNV
TGTPLAENSV RVEAGIGKKL TDNANLSLSY GGQFGSGVTD NAAHLKLNVR F
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