Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3843 |
Symbol | ispH |
ID | 8532269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4244273 |
End bp | 4245223 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_003261184 |
Protein GI | 261823078 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGATCC TGCTGGCTAA TCCACGCGGT TTTTGTGCCG GTGTCGATCG GGCTATCAGC ATTGTGGAAC GTGCGCTGGA GCTTTTTGGT ACGCCGATCT ACGTCCGTCA TGAAGTGGTA CATAATCGCT ATGTGGTTAA TGGCTTACGC GAACGCGGCG CGATTTTTAT TGAGCAGATC GAAGATGTGC CGGATGGTGC GATTCTGATT TTCTCGGCAC ATGGCGTTTC GCAAGCGGTA CGTAATGAAG CCAAAAATCG TGACCTGACG GTGTTCGATG CGACCTGTCC TCTGGTAACC AAGGTGCATA TGGAAGTTGC CAGAGCCAGT AAGAAAGGTG TCGAAGCGAT TCTTATCGGG CATGCCGGAC ACCCTGAAGT TGAAGGGACG ATGGGGCAGT ACAGCAGTGA AGATGGCGGC ATGTATCTGG TGGAGTCCCC TGAGGATGTC TGGCAGCTAC AGGTAAAAGA TGAAAGTAAT CTGTGCTTTA TGACGCAAAC TACGCTTTCT GTTGATGACA CCTATGCGGT GATTGATGCC TTGCGTGAGC GTTTCCCGCA GATTGTCGGC CCGCGTAAAG ATGACATCTG CTATGCCACG ACCAATCGTC AGGAAGCGGT TCGTCATTTG TCGGATAAGG CGGATGTCGT TTTTGTCGTG GGCTCTAAAA ACTCCTCAAA CTCCAACCGC CTTGCTGAAT TGGCGCAGAG AGCCGGGAAA GCGGCCTATC TGATTGATGC TGCCGAAGAT ATCCAGGAAT CATGGGTAAC GGGCGTTGCG CAGGTTGGCG TCACCGCAGG GGCATCGGCC CCGGATATTT TGGTTCAACA GGTGATTCAG CGCCTGAAAG AATTAGGCGG CAAGGTTGCG GTTGAAATGC AAGGGCGTGA AGAAAACATC GTCTTTGAAG TGCCGAAAGA ACTGCGTGTT GAAGTGAAAC AGATCGATTA G
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Protein sequence | MQILLANPRG FCAGVDRAIS IVERALELFG TPIYVRHEVV HNRYVVNGLR ERGAIFIEQI EDVPDGAILI FSAHGVSQAV RNEAKNRDLT VFDATCPLVT KVHMEVARAS KKGVEAILIG HAGHPEVEGT MGQYSSEDGG MYLVESPEDV WQLQVKDESN LCFMTQTTLS VDDTYAVIDA LRERFPQIVG PRKDDICYAT TNRQEAVRHL SDKADVVFVV GSKNSSNSNR LAELAQRAGK AAYLIDAAED IQESWVTGVA QVGVTAGASA PDILVQQVIQ RLKELGGKVA VEMQGREENI VFEVPKELRV EVKQID
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